Variant report

Variant	rs8191325
Chromosome Location	chr16:11769616-11769617
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:11760476..11764785-chr16:11766720..11769869,4	K562	blood:
2	chr16:11768556..11771119-chr16:11783391..11785154,2	MCF-7	breast:
3	chr16:11769010..11770946-chr16:11776974..11779938,2	MCF-7	breast:
4	chr16:11768134..11770155-chr16:11969703..11971604,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000184602	Chromatin interaction
ENSG00000153066	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10438540	1.00[JPT][hapmap]
rs16958657	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037143	chr16:11454248-11913932	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv457409	chr16:11542894-11822066	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv571456	chr16:11542894-11822066	Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv524676	chr16:11569454-11795579	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:11762800-11769800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
2	chr16:11763400-11770000	Enhancers	Pancreas	Pancrea
3	chr16:11763400-11775800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr16:11763600-11795600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr16:11764000-11769800	Weak transcription	Aorta	Aorta
6	chr16:11764000-11769800	Enhancers	Left Ventricle	heart
7	chr16:11764000-11770200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr16:11764000-11771200	Weak transcription	Osteobl	bone
9	chr16:11764000-11772200	Enhancers	HMEC	breast
10	chr16:11764200-11769800	Enhancers	Right Ventricle	heart
11	chr16:11764400-11770000	Enhancers	Primary T cells fromperipheralblood	blood
12	chr16:11764400-11770000	Enhancers	Liver	Liver
13	chr16:11764600-11769800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr16:11764600-11769800	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr16:11764600-11770000	Enhancers	Duodenum Mucosa	Duodenum
16	chr16:11764800-11769800	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr16:11764800-11769800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr16:11764800-11770800	Genic enhancers	Fetal Muscle Leg	muscle
19	chr16:11764800-11773400	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr16:11764800-11780000	Genic enhancers	Fetal Muscle Trunk	muscle
21	chr16:11765000-11774200	Genic enhancers	Spleen	Spleen
22	chr16:11765000-11783200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr16:11765200-11770200	Enhancers	HepG2	liver
24	chr16:11765400-11771800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr16:11765600-11771200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr16:11766000-11770800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr16:11766200-11769800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr16:11766600-11779200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
29	chr16:11767000-11769800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr16:11767000-11769800	Enhancers	NHEK	skin
31	chr16:11767000-11771200	Weak transcription	Fetal Heart	heart
32	chr16:11767000-11772200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
33	chr16:11767000-11773600	Weak transcription	K562	blood
34	chr16:11767200-11770000	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
35	chr16:11767200-11770200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr16:11767200-11770800	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr16:11767200-11773200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
38	chr16:11767200-11774200	Genic enhancers	Primary B cells from peripheral blood	blood
39	chr16:11767200-11774400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
40	chr16:11767400-11770000	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr16:11767400-11771200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr16:11767400-11774800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr16:11767600-11769800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr16:11767600-11770000	Weak transcription	Colon Smooth Muscle	Colon
45	chr16:11767600-11770200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr16:11767800-11769800	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
47	chr16:11767800-11773800	Genic enhancers	Primary B cells from cord blood	blood
48	chr16:11767800-11774400	Strong transcription	Primary T cells from cord blood	blood
49	chr16:11767800-11775400	Strong transcription	Thymus	Thymus
50	chr16:11768000-11770200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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