Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10092618	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs10808738	0.81[JPT][hapmap]
rs28679790	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3779870	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3779874	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[ASN][1000 genomes]
rs4236934	0.96[CEU][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4327886	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs4395923	0.81[JPT][hapmap]
rs4452822	0.81[JPT][hapmap]
rs4465006	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4467968	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4486246	0.92[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs4581093	0.81[JPT][hapmap]
rs6999999	0.81[JPT][hapmap]
rs7004685	0.96[CEU][hapmap]
rs7005708	0.96[CEU][hapmap];0.81[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7817744	0.92[CEU][hapmap]
rs8192899	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9298085	0.94[EUR][1000 genomes]
rs9298087	0.81[JPT][hapmap]
rs9298088	0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534001	chr8:64992196-65798776	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	esv1847262	chr8:65509694-65595527	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:65499800-65553000	Weak transcription	Pancreas	Pancrea
2	chr8:65500600-65526800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr8:65503600-65514400	Weak transcription	Fetal Lung	lung
4	chr8:65503600-65538400	Weak transcription	Fetal Kidney	kidney
5	chr8:65504200-65512200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr8:65505800-65521400	Weak transcription	Fetal Muscle Trunk	muscle
7	chr8:65506400-65513800	Weak transcription	Primary hematopoietic stem cells	blood
8	chr8:65507400-65526400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:65507600-65520200	Weak transcription	Brain Cingulate Gyrus	brain
10	chr8:65507800-65527200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr8:65509000-65514600	Weak transcription	Ovary	ovary
12	chr8:65509200-65516400	Weak transcription	Liver	Liver
13	chr8:65510000-65525400	Weak transcription	Esophagus	oesophagus
14	chr8:65510400-65511800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr8:65510400-65527400	Weak transcription	Adipose Nuclei	Adipose

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