Variant report

Variant rs823526
Chromosome Location chr3:195278296-195278297
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195272400-195278800 Enhancers Fetal Intestine Large intestine
2 chr3:195273200-195278400 Weak transcription Pancreas Pancrea
3 chr3:195274000-195278600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:195274600-195280600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:195274800-195278800 Enhancers Sigmoid Colon Sigmoid Colon
6 chr3:195275200-195278600 Weak transcription Gastric stomach
7 chr3:195275200-195278800 Enhancers Fetal Intestine Small intestine
8 chr3:195275600-195278400 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:195276000-195278400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr3:195276000-195282200 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr3:195276000-195282200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr3:195276200-195280000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr3:195276600-195278600 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr3:195276600-195278800 Enhancers HUES6 Cell Line embryonic stem cell
15 chr3:195276800-195278400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
16 chr3:195276800-195278800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr3:195276800-195278800 Enhancers Fetal Lung lung
18 chr3:195276800-195278800 Enhancers Skeletal Muscle Female skeletal muscle
19 chr3:195276800-195279000 Enhancers Fetal Muscle Leg muscle
20 chr3:195276800-195279000 Enhancers Small Intestine intestine
21 chr3:195276800-195279000 Enhancers Spleen Spleen
22 chr3:195277000-195278400 Enhancers Colonic Mucosa Colon
23 chr3:195277000-195278600 Enhancers Skeletal Muscle Male skeletal muscle
24 chr3:195277000-195278800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
25 chr3:195277000-195278800 Enhancers Adipose Nuclei Adipose
26 chr3:195277000-195278800 Bivalent Enhancer Fetal Stomach stomach
27 chr3:195277000-195278800 Enhancers Left Ventricle heart
28 chr3:195277000-195278800 Enhancers Rectal Mucosa Donor 31 rectum
29 chr3:195277000-195278800 Enhancers Right Ventricle heart
30 chr3:195277200-195278800 Enhancers Primary B cells from peripheral blood blood
31 chr3:195277200-195279200 Enhancers Esophagus oesophagus
32 chr3:195277200-195279200 Enhancers Fetal Muscle Trunk muscle
33 chr3:195277200-195282000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr3:195277400-195278400 Enhancers Primary neutrophils fromperipheralblood blood
35 chr3:195277400-195278600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:195277600-195278400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr3:195277600-195279000 Enhancers Duodenum Mucosa Duodenum
38 chr3:195277800-195278400 Weak transcription Right Atrium heart
39 chr3:195277800-195278800 Enhancers Primary B cells from cord blood blood
40 chr3:195277800-195278800 Enhancers Primary mononuclear cells fromperipheralblood Blood
41 chr3:195277800-195278800 Enhancers Psoas Muscle Psoas
42 chr3:195277800-195278800 Enhancers Dnd41 blood
43 chr3:195277800-195278800 Enhancers GM12878-XiMat blood
44 chr3:195277800-195279200 Enhancers Thymus Thymus
45 chr3:195277800-195280400 Enhancers HepG2 liver
46 chr3:195277800-195280600 Enhancers Primary T cells from cord blood blood
47 chr3:195277800-195280600 Enhancers Primary T regulatory cells fromperipheralblood blood
48 chr3:195277800-195280600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:195277800-195280600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr3:195277800-195280600 Enhancers Fetal Thymus thymus

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