Variant report
| Variant | rs826878 |
|---|---|
| Chromosome Location | chr12:39088837-39088838 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:39055800-39100800 | Weak transcription | NHEK | skin |
| 2 | chr12:39056000-39092200 | Weak transcription | Colon Smooth Muscle | Colon |
| 3 | chr12:39056000-39114800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr12:39056000-39168600 | Weak transcription | Hela-S3 | cervix |
| 5 | chr12:39066200-39114400 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:39069400-39114600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 7 | chr12:39074400-39098800 | Weak transcription | Right Ventricle | heart |
| 8 | chr12:39079200-39114400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 9 | chr12:39080600-39089400 | Weak transcription | A549 | lung |
| 10 | chr12:39080600-39115600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr12:39080800-39092400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 12 | chr12:39080800-39094200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 13 | chr12:39080800-39094200 | Weak transcription | Lung | lung |
| 14 | chr12:39080800-39095800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 15 | chr12:39080800-39096200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 16 | chr12:39080800-39097400 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr12:39080800-39098600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 18 | chr12:39080800-39105000 | Weak transcription | Adipose Nuclei | Adipose |
| 19 | chr12:39083400-39113200 | Weak transcription | Left Ventricle | heart |
| 20 | chr12:39084000-39091600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr12:39084200-39104800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr12:39086000-39114400 | Weak transcription | Aorta | Aorta |
| 23 | chr12:39087200-39094000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 24 | chr12:39087200-39097400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 25 | chr12:39087200-39113800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 26 | chr12:39087400-39092400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 27 | chr12:39087600-39090800 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 28 | chr12:39087600-39093400 | Weak transcription | GM12878-XiMat | blood |
| 29 | chr12:39087800-39094200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 30 | chr12:39087800-39098400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr12:39088000-39089200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 32 | chr12:39088200-39089400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 33 | chr12:39088200-39089400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 34 | chr12:39088200-39089600 | Strong transcription | Liver | Liver |
| 35 | chr12:39088400-39089200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 36 | chr12:39088400-39089400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 37 | chr12:39088400-39089600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 38 | chr12:39088400-39089600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 39 | chr12:39088400-39089600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr12:39088600-39089000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 41 | chr12:39088600-39089600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
