Variant report

Variant rs828622
Chromosome Location chr3:98544353-98544354
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98503400-98576400 Weak transcription Gastric stomach
2 chr3:98525600-98552400 Weak transcription Right Ventricle heart
3 chr3:98526400-98545000 Weak transcription Psoas Muscle Psoas
4 chr3:98527200-98545200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr3:98527200-98545600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:98528200-98575400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr3:98528600-98562000 Weak transcription Rectal Smooth Muscle rectum
8 chr3:98529400-98546200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:98532400-98546200 Weak transcription Esophagus oesophagus
10 chr3:98534000-98545000 Weak transcription Ovary ovary
11 chr3:98534000-98552400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:98534200-98552200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:98534400-98545600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr3:98534600-98545600 Weak transcription Fetal Intestine Small intestine
15 chr3:98536000-98552600 Weak transcription Pancreas Pancrea
16 chr3:98536200-98594200 Weak transcription HepG2 liver
17 chr3:98536800-98545000 Weak transcription Fetal Kidney kidney
18 chr3:98537000-98545600 Weak transcription HSMMtube muscle
19 chr3:98537000-98546200 Weak transcription Brain Anterior Caudate brain
20 chr3:98537000-98567000 Weak transcription Stomach Smooth Muscle stomach
21 chr3:98537000-98592800 Weak transcription K562 blood
22 chr3:98537400-98551200 Weak transcription Fetal Heart heart
23 chr3:98538200-98569200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr3:98538600-98544800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr3:98538600-98545000 Weak transcription Fetal Lung lung
26 chr3:98538800-98545400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr3:98538800-98548200 Weak transcription Adipose Nuclei Adipose
28 chr3:98538800-98552200 Weak transcription Left Ventricle heart
29 chr3:98539000-98544400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr3:98539400-98546400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr3:98540200-98545000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr3:98541200-98545000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr3:98541200-98545200 Weak transcription Fetal Muscle Leg muscle
34 chr3:98541200-98552200 Weak transcription Fetal Muscle Trunk muscle
35 chr3:98541200-98567000 Weak transcription Liver Liver
36 chr3:98541400-98565000 Weak transcription HUVEC blood vessel
37 chr3:98541600-98548400 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr3:98541800-98545600 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr3:98541800-98546600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr3:98542600-98545800 Genic enhancers Osteobl bone
41 chr3:98542800-98551200 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr3:98543000-98552400 Weak transcription NHLF lung
43 chr3:98543400-98545000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr3:98543400-98545200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:98543400-98546200 Weak transcription Right Atrium heart
46 chr3:98543400-98552400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:98543400-98552400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr3:98543400-98552400 Weak transcription Fetal Stomach stomach
49 chr3:98543600-98544800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:98543600-98544800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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