The 2.0 version of rSNPBase

Variant report

Variant rs829694
Chromosome Location chr2:30648577-30648578
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30644000-30648600 Enhancers Primary T cells fromperipheralblood blood
2 chr2:30644400-30650400 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr2:30645000-30652400 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr2:30645600-30648600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:30645600-30650800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr2:30645600-30650800 Weak transcription Fetal Intestine Large intestine
7 chr2:30645600-30651000 Weak transcription Gastric stomach
8 chr2:30645600-30656600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr2:30645800-30648600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:30645800-30648600 Enhancers NHDF-Ad bronchial
11 chr2:30645800-30650800 Weak transcription Stomach Mucosa stomach
12 chr2:30645800-30651000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr2:30645800-30651000 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr2:30645800-30656600 Weak transcription Fetal Lung lung
15 chr2:30646000-30653400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr2:30646400-30649000 Weak transcription Primary B cells from peripheral blood blood
17 chr2:30646400-30649200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr2:30646400-30651000 Weak transcription Placenta Amnion Placenta Amnion
19 chr2:30646400-30651200 Weak transcription K562 blood
20 chr2:30646400-30651600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr2:30646400-30652400 Enhancers Primary T helper cells PMA-I stimulated --
22 chr2:30646400-30656400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr2:30646400-30662600 Weak transcription Thymus Thymus
24 chr2:30646600-30649200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr2:30647000-30648600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:30647000-30648600 Enhancers HSMMtube muscle
27 chr2:30647000-30648600 Enhancers Osteobl bone
28 chr2:30647400-30648600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr2:30647400-30648600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr2:30647400-30648600 Enhancers NHEK skin
31 chr2:30647600-30649000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr2:30647600-30650800 Weak transcription Fetal Thymus thymus
33 chr2:30647600-30651400 Weak transcription Dnd41 blood
34 chr2:30647800-30648600 Enhancers Brain Angular Gyrus brain
35 chr2:30647800-30648600 Enhancers Brain Cingulate Gyrus brain
36 chr2:30647800-30648600 Enhancers Right Ventricle heart
37 chr2:30647800-30648600 Enhancers Stomach Smooth Muscle stomach
38 chr2:30647800-30649200 Weak transcription Primary T cells from cord blood blood
39 chr2:30647800-30659800 Weak transcription Left Ventricle heart
40 chr2:30648000-30648600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:30648000-30649400 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr2:30648000-30650800 Weak transcription Fetal Heart heart
43 chr2:30648200-30648600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr2:30648200-30649000 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr2:30648400-30648600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015