The 2.0 version of rSNPBase

Variant report

Variant rs829639
Chromosome Location chr2:30703247-30703248
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671600-30703400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:30678400-30704200 Weak transcription Fetal Stomach stomach
4 chr2:30678600-30703800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr2:30678600-30710600 Weak transcription NHLF lung
6 chr2:30682400-30704400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr2:30688200-30703400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:30688400-30703400 Weak transcription K562 blood
9 chr2:30688400-30703800 Weak transcription Left Ventricle heart
10 chr2:30688400-30704200 Weak transcription Aorta Aorta
11 chr2:30688400-30704600 Weak transcription Rectal Smooth Muscle rectum
12 chr2:30688600-30710000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr2:30693600-30704000 Weak transcription A549 lung
14 chr2:30693600-30704000 Weak transcription HepG2 liver
15 chr2:30695200-30707000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:30695400-30704400 Weak transcription Stomach Smooth Muscle stomach
17 chr2:30695600-30703600 Weak transcription GM12878-XiMat blood
18 chr2:30695600-30704200 Weak transcription Fetal Lung lung
19 chr2:30695600-30705400 Weak transcription Primary hematopoietic stem cells blood
20 chr2:30695800-30704000 Weak transcription NHDF-Ad bronchial
21 chr2:30695800-30704400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:30695800-30706600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr2:30696000-30704200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:30696200-30710600 Weak transcription Ovary ovary
25 chr2:30696600-30703400 Weak transcription Duodenum Mucosa Duodenum
26 chr2:30697200-30704200 Weak transcription Fetal Intestine Large intestine
27 chr2:30697400-30710400 Weak transcription Fetal Kidney kidney
28 chr2:30697800-30704200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr2:30697800-30720800 Weak transcription Thymus Thymus
30 chr2:30698000-30708000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr2:30698000-30709400 Weak transcription Pancreas Pancrea
32 chr2:30698200-30704200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:30698200-30704200 Weak transcription Right Atrium heart
34 chr2:30698200-30704400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:30698200-30710600 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:30698400-30706800 Weak transcription Primary B cells from peripheral blood blood
37 chr2:30698600-30704400 Weak transcription Primary B cells from cord blood blood
38 chr2:30699000-30704000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr2:30699000-30709600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr2:30699000-30711800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:30699600-30709400 Weak transcription Right Ventricle heart
42 chr2:30699800-30704200 Weak transcription Psoas Muscle Psoas
43 chr2:30700000-30703600 Weak transcription Fetal Heart heart
44 chr2:30701000-30703600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr2:30701200-30704400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:30701200-30705600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:30701200-30714400 Weak transcription HSMM muscle
48 chr2:30701400-30704200 Weak transcription Esophagus oesophagus
49 chr2:30701600-30703400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr2:30701600-30704200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015