The 2.0 version of rSNPBase

Variant report

Variant rs1252640
Chromosome Location chr2:30739298-30739299
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30726200-30742600 Weak transcription Pancreas Pancrea
2 chr2:30727800-30741400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:30729000-30741200 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:30732000-30739400 Enhancers Fetal Heart heart
6 chr2:30732800-30742000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:30733000-30756000 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr2:30734800-30741600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:30734800-30742200 Weak transcription Gastric stomach
10 chr2:30734800-30764000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:30735000-30741400 Weak transcription Primary T cells from cord blood blood
12 chr2:30735000-30741600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr2:30735000-30741800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:30735000-30742600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:30735000-30742600 Weak transcription HSMMtube muscle
16 chr2:30735400-30741600 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr2:30735400-30741600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:30735400-30741800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr2:30735400-30742200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr2:30735400-30742200 Weak transcription H9 Cell Line embryonic stem cell
21 chr2:30735400-30742600 Weak transcription Fetal Intestine Large intestine
22 chr2:30735600-30740800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:30735600-30741400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr2:30735600-30742800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr2:30736800-30752400 Weak transcription Psoas Muscle Psoas
26 chr2:30737000-30742400 Weak transcription Left Ventricle heart
27 chr2:30737600-30740400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:30737600-30742000 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr2:30737800-30740000 Weak transcription Small Intestine intestine
30 chr2:30737800-30741800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr2:30737800-30742600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:30738000-30740200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:30738000-30741400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:30738000-30741600 Weak transcription Fetal Thymus thymus
35 chr2:30738000-30741800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:30738000-30741800 Weak transcription Fetal Muscle Trunk muscle
37 chr2:30738000-30742200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:30738000-30742600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:30738000-30742600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr2:30738000-30742600 Weak transcription NHEK skin
41 chr2:30738000-30750400 Weak transcription Liver Liver
42 chr2:30738000-30757000 Weak transcription Ovary ovary
43 chr2:30738200-30740600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:30738200-30741800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:30738200-30741800 Weak transcription Duodenum Mucosa Duodenum
46 chr2:30738200-30742600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr2:30738200-30742600 Weak transcription Rectal Smooth Muscle rectum
48 chr2:30738200-30742600 Weak transcription NHLF lung
49 chr2:30738200-30742800 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr2:30738200-30744000 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015