The 2.0 version of rSNPBase

Variant report

Variant rs3862977
Chromosome Location chr2:30764048-30764049
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:30743000-30764600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr2:30743000-30764600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr2:30743000-30767400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:30743000-30768000 Weak transcription Rectal Smooth Muscle rectum
6 chr2:30749000-30812600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr2:30751000-30766800 Weak transcription NHLF lung
8 chr2:30753600-30770000 Weak transcription Small Intestine intestine
9 chr2:30753800-30768600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr2:30757800-30809000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:30758200-30795000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr2:30758400-30765800 Weak transcription Aorta Aorta
13 chr2:30758600-30853800 Weak transcription Thymus Thymus
14 chr2:30758800-30784400 Weak transcription Primary T cells fromperipheralblood blood
15 chr2:30758800-30785000 Weak transcription Left Ventricle heart
16 chr2:30758800-30809600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:30759000-30785200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr2:30759200-30767600 Weak transcription Fetal Kidney kidney
19 chr2:30759200-30805600 Weak transcription K562 blood
20 chr2:30759400-30764400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr2:30759400-30764400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr2:30759400-30764600 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr2:30759400-30767000 Weak transcription Fetal Heart heart
24 chr2:30759400-30769600 Weak transcription HepG2 liver
25 chr2:30759400-30785000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:30759400-30785000 Weak transcription Duodenum Mucosa Duodenum
27 chr2:30759400-30785000 Weak transcription Dnd41 blood
28 chr2:30759600-30764400 Weak transcription HSMM muscle
29 chr2:30759600-30764600 Weak transcription Primary T cells from cord blood blood
30 chr2:30759600-30771200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:30759600-30786000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:30761200-30767600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr2:30762200-30767400 Weak transcription Fetal Intestine Large intestine
34 chr2:30763000-30768000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr2:30763600-30764200 ZNF genes & repeats Fetal Thymus thymus
36 chr2:30763800-30764800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
37 chr2:30763800-30764800 ZNF genes & repeats Fetal Lung lung
38 chr2:30763800-30771800 Weak transcription Fetal Intestine Small intestine
39 chr2:30764000-30764200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr2:30764000-30764200 ZNF genes & repeats A549 lung
41 chr2:30764000-30764400 Strong transcription Primary B cells from cord blood blood
42 chr2:30764000-30765000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr2:30764000-30765000 ZNF genes & repeats GM12878-XiMat blood
44 chr2:30764000-30765200 Enhancers Primary T helper cells PMA-I stimulated --
45 chr2:30764000-30765400 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr2:30764000-30765400 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr2:30764000-30792400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015