Variant report
| Variant | rs833821 |
|---|---|
| Chromosome Location | chr12:49348936-49348937 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49319200-49349800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr12:49319800-49349400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr12:49329400-49349400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 4 | chr12:49330800-49349000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 5 | chr12:49332000-49349000 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr12:49333800-49349400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr12:49334800-49349400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr12:49334800-49349800 | Weak transcription | Psoas Muscle | Psoas |
| 9 | chr12:49335000-49349400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr12:49335000-49349800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr12:49335200-49349600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 12 | chr12:49335400-49349000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 13 | chr12:49335400-49349400 | Weak transcription | Liver | Liver |
| 14 | chr12:49335400-49349800 | Weak transcription | Spleen | Spleen |
| 15 | chr12:49337600-49349200 | Weak transcription | Brain Substantia Nigra | brain |
| 16 | chr12:49340000-49349000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr12:49340000-49349200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 18 | chr12:49340600-49349400 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr12:49340800-49349200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 20 | chr12:49340800-49349800 | Weak transcription | Right Ventricle | heart |
| 21 | chr12:49341000-49349000 | Weak transcription | Colon Smooth Muscle | Colon |
| 22 | chr12:49341400-49349400 | Weak transcription | Colonic Mucosa | Colon |
| 23 | chr12:49342800-49349000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 24 | chr12:49344600-49349400 | Strong transcription | HSMM | muscle |
| 25 | chr12:49344800-49349000 | Strong transcription | A549 | lung |
| 26 | chr12:49345600-49349200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 27 | chr12:49345800-49349200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 28 | chr12:49346000-49349000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 29 | chr12:49346000-49349200 | Strong transcription | Fetal Intestine Large | intestine |
| 30 | chr12:49346200-49349000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr12:49346200-49349200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 32 | chr12:49346200-49349200 | Strong transcription | Osteobl | bone |
| 33 | chr12:49346200-49349400 | Genic enhancers | K562 | blood |
| 34 | chr12:49346800-49349000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 35 | chr12:49346800-49349400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr12:49346800-49349600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 37 | chr12:49346800-49349800 | Weak transcription | Right Atrium | heart |
| 38 | chr12:49347000-49349000 | Weak transcription | Adipose Nuclei | Adipose |
| 39 | chr12:49347000-49349000 | Weak transcription | Fetal Kidney | kidney |
| 40 | chr12:49347000-49349200 | Weak transcription | Primary T cells from cord blood | blood |
| 41 | chr12:49347000-49349200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 42 | chr12:49347000-49349200 | Weak transcription | Fetal Lung | lung |
| 43 | chr12:49347000-49349600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 44 | chr12:49347000-49349800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr12:49347000-49349800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 46 | chr12:49347000-49349800 | Weak transcription | Esophagus | oesophagus |
| 47 | chr12:49347000-49349800 | Weak transcription | Gastric | stomach |
| 48 | chr12:49347000-49349800 | Weak transcription | Left Ventricle | heart |
| 49 | chr12:49347000-49349800 | Weak transcription | Ovary | ovary |
| 50 | chr12:49347000-49349800 | Weak transcription | Pancreas | Pancrea |
