The 2.0 version of rSNPBase

Variant report

Variant rs9788029
Chromosome Location chr12:49325578-49325579
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49314400-49338000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr12:49314400-49338600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:49319200-49349800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:49319400-49337800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr12:49319600-49326600 Weak transcription Aorta Aorta
6 chr12:49319600-49331800 Weak transcription Psoas Muscle Psoas
7 chr12:49319600-49332800 Weak transcription Small Intestine intestine
8 chr12:49319600-49334600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:49319800-49326000 Weak transcription Primary hematopoietic stem cells blood
10 chr12:49319800-49326200 Weak transcription Colonic Mucosa Colon
11 chr12:49319800-49326200 Weak transcription Duodenum Mucosa Duodenum
12 chr12:49319800-49326400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr12:49319800-49326400 Weak transcription Ovary ovary
14 chr12:49319800-49326400 Weak transcription Pancreas Pancrea
15 chr12:49319800-49326600 Weak transcription Fetal Brain Male brain
16 chr12:49319800-49326600 Weak transcription Gastric stomach
17 chr12:49319800-49326800 Weak transcription Right Ventricle heart
18 chr12:49319800-49328000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr12:49319800-49328800 Weak transcription Fetal Heart heart
20 chr12:49319800-49331400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr12:49319800-49333200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr12:49319800-49349400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr12:49320000-49326400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr12:49320000-49326400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr12:49320800-49329800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr12:49320800-49333400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:49320800-49333600 Strong transcription Primary hematopoietic stem cells short term culture blood
28 chr12:49320800-49335800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr12:49320800-49336000 Strong transcription A549 lung
30 chr12:49320800-49338600 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr12:49321000-49330200 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr12:49321000-49332200 Strong transcription Primary monocytes fromperipheralblood blood
33 chr12:49321000-49333400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:49321000-49334200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr12:49321000-49335000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr12:49321000-49335600 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr12:49321000-49335800 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr12:49321000-49336400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr12:49321000-49336800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr12:49321000-49338200 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr12:49321200-49326200 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr12:49321200-49332200 Strong transcription Muscle Satellite Cultured Cells --
43 chr12:49321400-49328800 Weak transcription Stomach Mucosa stomach
44 chr12:49321400-49334200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr12:49321600-49325600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr12:49321600-49334600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:49321800-49337800 Strong transcription Fetal Intestine Small intestine
48 chr12:49322800-49328200 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr12:49322800-49329200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr12:49322800-49335200 Strong transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015