Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1098921	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs11691063	0.89[ASN][1000 genomes]
rs16824418	0.99[ASN][1000 genomes]
rs16824423	0.99[ASN][1000 genomes]
rs16824429	0.99[ASN][1000 genomes]
rs16824430	1.00[ASN][1000 genomes]
rs16824433	0.99[ASN][1000 genomes]
rs16824444	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16824461	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16824581	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1946810	0.88[ASN][1000 genomes]
rs2218030	0.97[ASN][1000 genomes]
rs842552	0.85[ASN][1000 genomes]
rs842561	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs842566	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs842570	0.83[AFR][1000 genomes]
rs842583	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs842585	0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs842594	0.99[ASN][1000 genomes]
rs842598	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs864004	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[ASN][1000 genomes]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs842573	STAT1	trans	brain	seeQTL
rs842573	IFIT3	trans	brain	seeQTL
rs842573	ROM1	trans	brain	seeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184289800-184297800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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