Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:105601501..105604320-chr9:105604736..105606990,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10512306	0.88[ASN][1000 genomes]
rs10990347	0.95[ASN][1000 genomes]
rs10990357	0.95[ASN][1000 genomes]
rs10990358	1.00[ASN][1000 genomes]
rs10990359	0.97[ASN][1000 genomes]
rs10990361	0.95[ASN][1000 genomes]
rs1418780	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16922210	0.95[ASN][1000 genomes]
rs16922216	0.95[ASN][1000 genomes]
rs2220706	0.81[ASN][1000 genomes]
rs2812591	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4742862	0.97[ASN][1000 genomes]
rs56351068	0.81[ASN][1000 genomes]
rs7023672	0.97[ASN][1000 genomes]
rs7040321	0.93[ASN][1000 genomes]
rs843260	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs843262	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs843263	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs843264	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs843269	0.98[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs843270	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs859996	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047080	chr9:105432479-105658235	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv540185	chr9:105432479-105658235	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1054263	chr9:105570212-105754741	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv893655	chr9:105583926-105620803	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv430086	chr9:105585487-105632182	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1054932	chr9:105585667-105646429	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv1053435	chr9:105594399-105733795	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:105602400-105606800	Enhancers	Fetal Intestine Small	intestine
2	chr9:105604200-105607800	Enhancers	Fetal Intestine Large	intestine
3	chr9:105605000-105607800	Enhancers	Duodenum Mucosa	Duodenum
4	chr9:105605200-105607400	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr9:105606400-105607000	Enhancers	Small Intestine	intestine

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