The 2.0 version of rSNPBase

Variant report

Variant rs864137
Chromosome Location chr5:179412482-179412483
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179392600-179414800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:179396600-179461800 Weak transcription HSMM muscle
3 chr5:179404400-179421400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:179404600-179439800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:179405200-179413600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr5:179405200-179421800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr5:179405200-179428200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:179405200-179429000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr5:179405200-179453400 Weak transcription Rectal Smooth Muscle rectum
10 chr5:179405800-179414400 Weak transcription H9 Cell Line embryonic stem cell
11 chr5:179406000-179418400 Weak transcription Fetal Lung lung
12 chr5:179406000-179428600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr5:179406600-179425400 Weak transcription Colon Smooth Muscle Colon
14 chr5:179406800-179421600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:179407000-179428200 Weak transcription Gastric stomach
16 chr5:179407200-179415000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr5:179407800-179413400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr5:179407800-179414600 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr5:179407800-179414600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr5:179407800-179414800 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr5:179407800-179417400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:179407800-179421000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr5:179408000-179413200 Weak transcription Brain Hippocampus Middle brain
24 chr5:179408000-179413200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr5:179408000-179413200 Weak transcription Brain Substantia Nigra brain
26 chr5:179408000-179416200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr5:179408000-179418400 Weak transcription Adipose Nuclei Adipose
28 chr5:179408000-179418800 Weak transcription H1 Cell Line embryonic stem cell
29 chr5:179408000-179427800 Weak transcription Liver Liver
30 chr5:179408000-179428200 Weak transcription Left Ventricle heart
31 chr5:179408200-179416000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr5:179408200-179428000 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr5:179408400-179413000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:179408400-179417200 Weak transcription Aorta Aorta
35 chr5:179408400-179417400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr5:179408400-179417400 Weak transcription Brain Germinal Matrix brain
37 chr5:179408400-179418000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:179408400-179418800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr5:179408400-179421400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr5:179408400-179421600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr5:179408600-179418600 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr5:179408800-179421400 Weak transcription Fetal Brain Male brain
43 chr5:179409200-179416000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr5:179409400-179413200 Weak transcription K562 blood
45 chr5:179409600-179418800 Weak transcription Fetal Brain Female brain
46 chr5:179410400-179418200 Weak transcription Primary hematopoietic stem cells blood
47 chr5:179411400-179414400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr5:179411400-179419400 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr5:179411400-179421600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr5:179411600-179414800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015