Variant report

Variant	rs866112
Chromosome Location	chr8:59973445-59973446
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:59960543..59962847-chr8:59972760..59975751,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16924622	1.00[YRI][hapmap]
rs172654	1.00[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2290526	1.00[YRI][hapmap]
rs2956799	1.00[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs310369	1.00[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs443245	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4737533	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59957800-59989800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr8:59968000-59973600	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr8:59968000-59976600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr8:59968200-59975600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr8:59968200-59976400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr8:59968600-59981200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr8:59968800-59974200	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr8:59969600-59975400	Enhancers	Dnd41	blood
9	chr8:59969600-59979400	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr8:59969600-59995400	Weak transcription	Osteobl	bone
11	chr8:59970000-59976400	Weak transcription	Primary hematopoietic stem cells	blood
12	chr8:59971400-59974000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr8:59971400-59974200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr8:59971400-59974600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr8:59971400-59979200	Weak transcription	Small Intestine	intestine
16	chr8:59971400-59982400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr8:59971600-59974000	Weak transcription	Fetal Thymus	thymus
18	chr8:59971600-59974800	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr8:59971600-59976600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr8:59971600-59978600	Weak transcription	Thymus	Thymus
21	chr8:59971800-59974600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr8:59971800-59977800	Weak transcription	Duodenum Mucosa	Duodenum
23	chr8:59971800-59978800	Weak transcription	Fetal Heart	heart
24	chr8:59972000-59976400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr8:59972200-59974200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
26	chr8:59972400-59974400	Weak transcription	HUES6 Cell Line	embryonic stem cell
27	chr8:59972400-59974400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
28	chr8:59972400-59974400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr8:59972400-59976400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr8:59972400-59976400	Weak transcription	Colon Smooth Muscle	Colon
31	chr8:59972400-59976600	Weak transcription	Pancreatic Islets	Pancreatic Islet
32	chr8:59972400-59977600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr8:59972400-59978400	Weak transcription	Rectal Smooth Muscle	rectum
34	chr8:59972800-59974200	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr8:59972800-59975800	Weak transcription	Cortex derived primary cultured neurospheres	brain
36	chr8:59972800-59976400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
37	chr8:59972800-59977600	Weak transcription	Primary T cells from cord blood	blood
38	chr8:59973000-59974600	Weak transcription	H1 Cell Line	embryonic stem cell
39	chr8:59973400-59973600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr8:59973400-59973600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
41	chr8:59973400-59974000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
42	chr8:59973400-59974400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
43	chr8:59973400-59980600	Enhancers	iPS-15b Cell Line	embryonic stem cell

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