Variant report

Variant rs878813
Chromosome Location chr22:33226764-33226765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33201000-33227400 Weak transcription Aorta Aorta
2 chr22:33204800-33227800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr22:33211000-33240400 Genic enhancers Left Ventricle heart
4 chr22:33212600-33227000 Weak transcription Liver Liver
5 chr22:33213600-33227000 Weak transcription H9 Cell Line embryonic stem cell
6 chr22:33216000-33226800 Weak transcription Fetal Thymus thymus
7 chr22:33217800-33229000 Weak transcription NHLF lung
8 chr22:33217800-33248600 Weak transcription Gastric stomach
9 chr22:33220600-33229800 Enhancers Skeletal Muscle Female skeletal muscle
10 chr22:33221800-33228400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr22:33222200-33236000 Enhancers Right Atrium heart
12 chr22:33222400-33229000 Genic enhancers Fetal Stomach stomach
13 chr22:33222600-33227000 Enhancers NHDF-Ad bronchial
14 chr22:33222600-33227200 Enhancers Brain Inferior Temporal Lobe brain
15 chr22:33222600-33228000 Enhancers Duodenum Smooth Muscle Duodenum
16 chr22:33222600-33230800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
17 chr22:33222600-33240400 Genic enhancers Adipose Nuclei Adipose
18 chr22:33222600-33258800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr22:33222800-33228000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr22:33222800-33228200 Enhancers Brain Hippocampus Middle brain
21 chr22:33222800-33238200 Genic enhancers Fetal Muscle Leg muscle
22 chr22:33223000-33228200 Enhancers Brain Substantia Nigra brain
23 chr22:33223200-33232600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr22:33223400-33235400 Weak transcription Fetal Intestine Large intestine
25 chr22:33223600-33227600 Enhancers Fetal Brain Male brain
26 chr22:33223600-33228200 Enhancers Brain Cingulate Gyrus brain
27 chr22:33223800-33228200 Enhancers Brain Anterior Caudate brain
28 chr22:33223800-33228200 Genic enhancers Fetal Muscle Trunk muscle
29 chr22:33223800-33229000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr22:33224000-33226800 Genic enhancers Breast Myoepithelial Primary Cells Breast
31 chr22:33224000-33226800 Genic enhancers Stomach Smooth Muscle stomach
32 chr22:33224200-33233400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr22:33224600-33227000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr22:33224600-33227200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr22:33224600-33227800 Strong transcription HMEC breast
36 chr22:33224600-33229000 Genic enhancers Lung lung
37 chr22:33224800-33226800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr22:33224800-33234200 Weak transcription Fetal Kidney kidney
39 chr22:33225200-33226800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr22:33225200-33227000 Strong transcription Placenta Amnion Placenta Amnion
41 chr22:33225400-33228000 Enhancers Fetal Lung lung
42 chr22:33225600-33228000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr22:33225600-33228000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr22:33225600-33228200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr22:33225600-33228400 Enhancers H1 Cell Line embryonic stem cell
46 chr22:33225800-33226800 Enhancers HSMM muscle
47 chr22:33225800-33227400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr22:33225800-33227600 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr22:33225800-33227800 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr22:33225800-33228000 Enhancers HUES64 Cell Line embryonic stem cell

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