Variant report

Variant	rs881591
Chromosome Location	chr4:147868622-147868623
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10034043	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1437263	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1469921	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1509333	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2028126	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2289164	0.84[LWK][hapmap];0.82[MKK][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2304536	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28676537	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62329363	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs748826	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs748827	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs882189	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs969510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs969512	0.87[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147867600-147869000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr4:147867600-147880600	Weak transcription	Pancreas	Pancrea
3	chr4:147867800-147869000	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr4:147867800-147869000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr4:147867800-147869600	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr4:147867800-147869600	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr4:147868000-147868800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr4:147868000-147869000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr4:147868000-147869000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr4:147868200-147868800	Bivalent Enhancer	Primary B cells from cord blood	blood
11	chr4:147868200-147869000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr4:147868200-147869200	Weak transcription	Thymus	Thymus
13	chr4:147868200-147872600	Weak transcription	Psoas Muscle	Psoas
14	chr4:147868400-147868800	Enhancers	Primary T cells from cord blood	blood
15	chr4:147868400-147869200	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr4:147868600-147868800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
17	chr4:147868600-147869400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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