Variant report

Variant	rs891384
Chromosome Location	chr2:167931385-167931386
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10497315	0.82[AMR][1000 genomes]
rs11899748	0.81[AMR][1000 genomes]
rs12105903	0.85[AMR][1000 genomes]
rs1429930	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs16852941	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61084716	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6432975	0.81[AMR][1000 genomes]
rs6706173	0.81[AMR][1000 genomes]
rs6742332	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7572454	0.82[AMR][1000 genomes]
rs7580360	0.85[AMR][1000 genomes]
rs7606905	0.85[AMR][1000 genomes]
rs7607028	0.85[AMR][1000 genomes]
rs9967718	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167931000-167931400	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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