The 2.0 version of rSNPBase

Variant report

Variant rs894205
Chromosome Location chr3:100132897-100132898
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100122000-100143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:100122600-100133600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:100122600-100149200 Weak transcription Left Ventricle heart
4 chr3:100123000-100133600 Weak transcription Stomach Smooth Muscle stomach
5 chr3:100123200-100133600 Weak transcription A549 lung
6 chr3:100123200-100135400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:100124200-100143600 Weak transcription Hela-S3 cervix
8 chr3:100126400-100133200 Weak transcription Brain Hippocampus Middle brain
9 chr3:100126400-100143200 Weak transcription Duodenum Mucosa Duodenum
10 chr3:100126600-100139800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr3:100127400-100133000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr3:100127400-100134200 Weak transcription Gastric stomach
13 chr3:100127400-100139000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr3:100127400-100144200 Weak transcription Pancreas Pancrea
15 chr3:100127600-100134800 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr3:100127600-100137800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr3:100127600-100146200 Weak transcription Ovary ovary
18 chr3:100127600-100148200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:100130200-100135400 Weak transcription Fetal Intestine Large intestine
20 chr3:100130600-100136000 Weak transcription Fetal Lung lung
21 chr3:100130600-100139000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr3:100130600-100142400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:100130600-100162800 Weak transcription Fetal Brain Male brain
24 chr3:100131000-100139000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:100131200-100143400 Weak transcription Liver Liver
26 chr3:100131400-100133600 Weak transcription Fetal Stomach stomach
27 chr3:100131800-100135400 Enhancers HUES48 Cell Line embryonic stem cell
28 chr3:100132000-100133000 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr3:100132000-100133200 Enhancers HUES6 Cell Line embryonic stem cell
30 chr3:100132000-100133200 Enhancers HUES64 Cell Line embryonic stem cell
31 chr3:100132000-100135000 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr3:100132000-100142800 Weak transcription Fetal Intestine Small intestine
33 chr3:100132000-100148200 Weak transcription Aorta Aorta
34 chr3:100132200-100133000 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr3:100132200-100134200 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr3:100132200-100134800 Weak transcription HepG2 liver
37 chr3:100132200-100151600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:100132600-100133200 Enhancers H9 Cell Line embryonic stem cell
39 chr3:100132800-100134000 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr3:100132800-100139800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr3:100132800-100157800 Weak transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015