Variant report

Variant rs894961
Chromosome Location chr2:55347472-55347473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55337200-55351000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:55339400-55351000 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:55340800-55348000 Enhancers Brain Hippocampus Middle brain
4 chr2:55340800-55348000 Enhancers Brain Substantia Nigra brain
5 chr2:55342400-55350200 Enhancers Fetal Heart heart
6 chr2:55344400-55350200 Enhancers Brain Cingulate Gyrus brain
7 chr2:55344400-55350600 Enhancers Brain Inferior Temporal Lobe brain
8 chr2:55344600-55348600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr2:55344600-55350000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr2:55345200-55349000 Enhancers Primary hematopoietic stem cells blood
11 chr2:55345400-55350200 Enhancers Primary monocytes fromperipheralblood blood
12 chr2:55345400-55350200 Enhancers Brain Angular Gyrus brain
13 chr2:55345600-55348000 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr2:55345600-55348000 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr2:55345600-55348200 Enhancers Primary B cells from cord blood blood
16 chr2:55345600-55348200 Enhancers Primary B cells from peripheral blood blood
17 chr2:55345600-55348400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:55345600-55350200 Enhancers Brain Germinal Matrix brain
19 chr2:55345600-55350200 Enhancers Monocytes-CD14+_RO01746 blood
20 chr2:55345600-55350400 Enhancers Primary neutrophils fromperipheralblood blood
21 chr2:55345800-55347600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr2:55345800-55347600 Enhancers Osteobl bone
23 chr2:55345800-55348400 Enhancers HUES6 Cell Line embryonic stem cell
24 chr2:55345800-55348400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr2:55345800-55348400 Enhancers Fetal Thymus thymus
26 chr2:55345800-55348600 Enhancers HUES64 Cell Line embryonic stem cell
27 chr2:55345800-55348600 Enhancers Adipose Nuclei Adipose
28 chr2:55345800-55348800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:55345800-55348800 Enhancers NHDF-Ad bronchial
30 chr2:55345800-55349000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr2:55346000-55347800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr2:55346000-55347800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:55346000-55347800 Enhancers Spleen Spleen
34 chr2:55346000-55348200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:55346000-55351600 Enhancers Cortex derived primary cultured neurospheres brain
36 chr2:55346200-55350000 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr2:55346400-55347800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:55346400-55348600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:55346400-55349600 Weak transcription HUVEC blood vessel
40 chr2:55346600-55347600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr2:55346600-55348000 Enhancers GM12878-XiMat blood
42 chr2:55346600-55348600 Flanking Active TSS Muscle Satellite Cultured Cells --
43 chr2:55346600-55350800 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr2:55346800-55347800 Enhancers Right Atrium heart
45 chr2:55346800-55348000 Enhancers H1 Cell Line embryonic stem cell
46 chr2:55346800-55348000 Flanking Active TSS Brain Anterior Caudate brain
47 chr2:55346800-55348000 Enhancers Colon Smooth Muscle Colon
48 chr2:55346800-55348400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr2:55346800-55348400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr2:55346800-55348400 Enhancers Duodenum Smooth Muscle Duodenum

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