Variant report

Variant	rs902096
Chromosome Location	chr4:26522786-26522787
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12331479	0.82[EUR][1000 genomes]
rs1565296	0.81[AMR][1000 genomes]
rs2130247	0.82[EUR][1000 genomes]
rs28494810	0.80[EUR][1000 genomes]
rs28690867	0.81[EUR][1000 genomes]
rs28707756	0.80[EUR][1000 genomes]
rs73813628	0.80[EUR][1000 genomes]
rs7666277	0.80[EUR][1000 genomes]
rs7696581	0.80[EUR][1000 genomes]
rs902095	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26514400-26526600	Weak transcription	NHLF	lung
2	chr4:26522200-26523000	Enhancers	K562	blood
3	chr4:26522400-26523000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr4:26522400-26523200	Enhancers	Colon Smooth Muscle	Colon
5	chr4:26522600-26522800	Enhancers	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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