Variant report

Variant	rs921136
Chromosome Location	chr2:30981420-30981421
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533886	chr2:30130019-31068764	ZNF genes & repeats Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv873770	chr2:30952987-30984850	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv520269	chr2:30958137-30988375	Weak transcription Bivalent Enhancer Strong transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv456019	chr2:30968228-30984850	Weak transcription Bivalent Enhancer Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
5	nsv581267	chr2:30968228-30984850	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:30965800-30999400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr2:30968200-30985600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:30971000-30984800	Weak transcription	Stomach Mucosa	stomach
4	chr2:30978600-30984600	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr2:30979200-30981600	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr2:30979600-30985000	Weak transcription	Fetal Intestine Small	intestine
7	chr2:30979600-30985400	Weak transcription	Duodenum Mucosa	Duodenum
8	chr2:30980400-30981600	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
9	chr2:30980600-30981600	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr2:30980600-30981600	Enhancers	NHDF-Ad	bronchial
11	chr2:30980600-30983800	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr2:30980800-30988200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr2:30980800-31003600	Weak transcription	Pancreas	Pancrea
14	chr2:30980800-31019800	Weak transcription	Brain Hippocampus Middle	brain
15	chr2:30981000-30985000	Weak transcription	Gastric	stomach
16	chr2:30981000-30986200	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr2:30981400-30981600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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