Variant report

Variant	rs926027
Chromosome Location	chr14:22192106-22192107
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1018344	0.83[ASN][1000 genomes]
rs8013476	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042309	chr14:22042511-22866936	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
2	nsv456147	chr14:22073473-22305071	Enhancers Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv563851	chr14:22073473-22305071	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	nsv510629	chr14:22134425-22215842	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:22188400-22209600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:22191400-22192800	Active TSS	Primary T helper cells PMA-I stimulated	--
3	chr14:22191600-22192400	Active TSS	Fetal Thymus	thymus
4	chr14:22191600-22192600	Active TSS	Primary T cells from cord blood	blood
5	chr14:22191600-22192600	Active TSS	Primary T killer memory cells from peripheral blood	blood
6	chr14:22191800-22192600	Active TSS	Thymus	Thymus
7	chr14:22192000-22192200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
8	chr14:22192000-22192400	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
9	chr14:22192000-22192400	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
10	chr14:22192000-22192400	Bivalent/Poised TSS	Primary T killer naive cells fromperipheralblood	blood
11	chr14:22192000-22192800	Bivalent/Poised TSS	Primary T cells fromperipheralblood	blood
12	chr14:22192000-22192800	Active TSS	Primary T helper cells fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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