The 2.0 version of rSNPBase

Variant report

Variant rs9305293
Chromosome Location chr21:28222179-28222180
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:28219200-28223000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr21:28219400-28223400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr21:28219400-28224800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr21:28219400-28229000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr21:28219600-28222200 Weak transcription Stomach Smooth Muscle stomach
6 chr21:28219600-28223000 Weak transcription H9 Cell Line embryonic stem cell
7 chr21:28219600-28223200 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr21:28219600-28223400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr21:28219600-28223400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr21:28219600-28223400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr21:28219600-28223400 Weak transcription Placenta Amnion Placenta Amnion
12 chr21:28219800-28222600 Weak transcription Fetal Kidney kidney
13 chr21:28219800-28223600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr21:28220000-28222200 Weak transcription Fetal Intestine Large intestine
15 chr21:28220000-28222200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr21:28220000-28222400 Enhancers Dnd41 blood
17 chr21:28220200-28223000 Weak transcription Brain Substantia Nigra brain
18 chr21:28220200-28223400 Weak transcription Brain Angular Gyrus brain
19 chr21:28220600-28222800 Weak transcription Fetal Stomach stomach
20 chr21:28220600-28223200 Weak transcription Brain Anterior Caudate brain
21 chr21:28221400-28223000 Enhancers Duodenum Smooth Muscle Duodenum
22 chr21:28221400-28223200 Enhancers Fetal Lung lung
23 chr21:28221600-28222200 Enhancers NHDF-Ad bronchial
24 chr21:28221600-28222400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr21:28221600-28222400 Enhancers Colon Smooth Muscle Colon
26 chr21:28221600-28222400 Enhancers Pancreatic Islets Pancreatic Islet
27 chr21:28221600-28222400 Enhancers Hela-S3 cervix
28 chr21:28221600-28222400 Enhancers HSMM muscle
29 chr21:28221600-28223000 Enhancers Muscle Satellite Cultured Cells --
30 chr21:28221800-28222200 Weak transcription NHLF lung
31 chr21:28221800-28222800 Weak transcription Brain Cingulate Gyrus brain
32 chr21:28221800-28223000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr21:28221800-28223200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr21:28222000-28222200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr21:28222000-28222200 Enhancers Osteobl bone
36 chr21:28222000-28222400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr21:28222000-28222400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr21:28222000-28222400 Enhancers HUVEC blood vessel
39 chr21:28222000-28222800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr21:28222000-28223200 Weak transcription Brain Hippocampus Middle brain
41 chr21:28222000-28224600 Enhancers Liver Liver
42 chr21:28222000-28225800 Enhancers HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015