Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143603471..143605267-chr6:143607615..143610028,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6933721	0.96[CEU][hapmap];0.82[JPT][hapmap];0.80[EUR][1000 genomes]
rs7763696	0.96[CEU][hapmap];0.81[JPT][hapmap];0.80[EUR][1000 genomes]
rs9373384	0.83[YRI][hapmap]
rs9399433	0.92[CEU][hapmap]
rs9403479	0.83[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs9321898	SHPRH	cis	cerebellum	SCAN

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
2	chr6:143583400-143606000	Weak transcription	Fetal Intestine Small	intestine
3	chr6:143583800-143615400	Weak transcription	K562	blood
4	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
5	chr6:143591400-143605200	Weak transcription	Liver	Liver
6	chr6:143592200-143605600	Weak transcription	Adipose Nuclei	Adipose
7	chr6:143593200-143606800	Weak transcription	NHEK	skin
8	chr6:143593400-143607000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr6:143595400-143605400	Weak transcription	HepG2	liver
10	chr6:143598600-143620200	Weak transcription	Brain Angular Gyrus	brain
11	chr6:143600600-143609200	Weak transcription	Brain Anterior Caudate	brain
12	chr6:143603000-143611000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr6:143603200-143605600	Weak transcription	HMEC	breast
14	chr6:143603200-143606200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr6:143603200-143607000	Weak transcription	Fetal Heart	heart
16	chr6:143603200-143609600	Weak transcription	Brain Cingulate Gyrus	brain
17	chr6:143603200-143616800	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr6:143603200-143622200	Weak transcription	Brain Hippocampus Middle	brain
19	chr6:143604000-143605800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:143604400-143605800	Enhancers	Ovary	ovary

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