The 2.0 version of rSNPBase

Variant report

Variant rs9321901
Chromosome Location chr6:143654353-143654354
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143642600-143675600 Weak transcription Left Ventricle heart
2 chr6:143643800-143661200 Weak transcription Aorta Aorta
3 chr6:143645000-143683200 Weak transcription Pancreas Pancrea
4 chr6:143645200-143656800 Weak transcription Psoas Muscle Psoas
5 chr6:143645800-143655600 Weak transcription Fetal Brain Female brain
6 chr6:143646000-143664000 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr6:143647200-143657400 Weak transcription NHLF lung
8 chr6:143647400-143658200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:143650400-143654800 Weak transcription Fetal Intestine Large intestine
10 chr6:143650800-143657200 Weak transcription NH-A brain
11 chr6:143650800-143657400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr6:143650800-143657400 Weak transcription NHDF-Ad bronchial
13 chr6:143652400-143662200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:143652800-143656400 Weak transcription Right Ventricle heart
15 chr6:143652800-143664000 Weak transcription Duodenum Mucosa Duodenum
16 chr6:143653000-143658200 Weak transcription Fetal Intestine Small intestine
17 chr6:143653000-143659000 Weak transcription K562 blood
18 chr6:143653000-143662200 Weak transcription Stomach Smooth Muscle stomach
19 chr6:143653000-143665600 Weak transcription Brain Cingulate Gyrus brain
20 chr6:143653200-143654600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:143653400-143654400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:143653400-143654600 Enhancers HSMM muscle
23 chr6:143653400-143654800 Enhancers HMEC breast
24 chr6:143653400-143663800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:143653600-143655200 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr6:143653600-143656000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:143653600-143658000 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:143653800-143654800 Weak transcription Adipose Nuclei Adipose
29 chr6:143653800-143655200 Weak transcription Lung lung
30 chr6:143653800-143657800 Weak transcription HSMMtube muscle
31 chr6:143653800-143660600 Weak transcription Fetal Stomach stomach
32 chr6:143653800-143661000 Weak transcription Fetal Muscle Leg muscle
33 chr6:143653800-143663400 Weak transcription Fetal Lung lung
34 chr6:143654000-143654400 Flanking Active TSS NHEK skin
35 chr6:143654000-143654400 Weak transcription Osteobl bone
36 chr6:143654000-143654600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:143654000-143654800 Enhancers Muscle Satellite Cultured Cells --
38 chr6:143654000-143656200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:143654000-143672000 Weak transcription Ovary ovary
40 chr6:143654200-143654400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr6:143654200-143654400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr6:143654200-143655400 Weak transcription Brain Anterior Caudate brain
43 chr6:143654200-143656200 Enhancers Cortex derived primary cultured neurospheres brain
44 chr6:143654200-143656200 Strong transcription HepG2 liver
45 chr6:143654200-143656600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr6:143654200-143657400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr6:143654200-143661600 Strong transcription Liver Liver

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Last update: Aug 31, 2015