The 2.0 version of rSNPBase

Variant report

Variant rs9348660
Chromosome Location chr6:25040977-25040978
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25035200-25041200 Weak transcription Fetal Kidney kidney
2 chr6:25035200-25044600 Weak transcription Right Atrium heart
3 chr6:25035800-25041000 Enhancers Fetal Thymus thymus
4 chr6:25036000-25042400 Weak transcription Lung lung
5 chr6:25036400-25041000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr6:25036400-25041000 Weak transcription Duodenum Mucosa Duodenum
7 chr6:25036600-25041200 Weak transcription NH-A brain
8 chr6:25036600-25041800 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr6:25037000-25041000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr6:25038600-25041200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr6:25038600-25041400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr6:25038600-25042200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
13 chr6:25039000-25041400 Enhancers Primary B cells from cord blood blood
14 chr6:25039000-25041400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:25039000-25042000 Flanking Active TSS Dnd41 blood
16 chr6:25039000-25043800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr6:25039400-25041400 Flanking Active TSS Primary T cells fromperipheralblood blood
18 chr6:25039400-25041800 Weak transcription Small Intestine intestine
19 chr6:25039600-25041000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr6:25039600-25041200 Weak transcription Spleen Spleen
21 chr6:25039600-25041200 Enhancers Monocytes-CD14+_RO01746 blood
22 chr6:25039800-25041000 Enhancers Primary T cells from cord blood blood
23 chr6:25039800-25041000 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr6:25039800-25041400 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr6:25040000-25041000 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr6:25040000-25041400 Weak transcription Fetal Heart heart
27 chr6:25040200-25041000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
28 chr6:25040200-25043000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
29 chr6:25040400-25041000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:25040400-25041000 Enhancers GM12878-XiMat blood
31 chr6:25040400-25041400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
32 chr6:25040600-25041000 Weak transcription Fetal Lung lung
33 chr6:25040600-25041400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
34 chr6:25040600-25041400 Enhancers Sigmoid Colon Sigmoid Colon
35 chr6:25040600-25042800 Flanking Active TSS Primary B cells from peripheral blood blood
36 chr6:25040600-25043200 Flanking Active TSS Primary hematopoietic stem cells blood
37 chr6:25040800-25041000 Active TSS Primary hematopoietic stem cells short term culture blood
38 chr6:25040800-25041000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:25040800-25041400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
40 chr6:25040800-25042600 Active TSS Thymus Thymus

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Last update: Aug 31, 2015