Variant report

Variant rs9365561
Chromosome Location chr6:163776232-163776233
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163767600-163776600 Enhancers Brain Cingulate Gyrus brain
2 chr6:163768200-163776400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:163768200-163776400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr6:163772200-163778000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:163772200-163778600 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr6:163772400-163778800 Enhancers Placenta Placenta
7 chr6:163773400-163776800 Enhancers Brain Angular Gyrus brain
8 chr6:163773400-163777600 Enhancers Fetal Muscle Leg muscle
9 chr6:163773600-163778000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr6:163774400-163776600 Enhancers Brain Substantia Nigra brain
11 chr6:163775000-163777600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:163775000-163777600 Enhancers Cortex derived primary cultured neurospheres brain
13 chr6:163775000-163778000 Enhancers Hela-S3 cervix
14 chr6:163775000-163778400 Enhancers Fetal Heart heart
15 chr6:163775200-163776400 Enhancers Right Ventricle heart
16 chr6:163775200-163777200 Enhancers Fetal Lung lung
17 chr6:163775200-163777400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:163775200-163777400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr6:163775200-163777400 Enhancers Spleen Spleen
20 chr6:163775200-163777400 Enhancers HSMMtube muscle
21 chr6:163775200-163777800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:163775200-163778000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:163775200-163778000 Enhancers NHEK skin
24 chr6:163775200-163778200 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr6:163775200-163778400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:163775200-163778400 Enhancers Lung lung
27 chr6:163775400-163777200 Enhancers Fetal Stomach stomach
28 chr6:163775400-163777400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:163775400-163777400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:163775400-163777400 Flanking Active TSS Brain Hippocampus Middle brain
31 chr6:163775600-163777000 Enhancers Placenta Amnion Placenta Amnion
32 chr6:163775800-163776400 Enhancers Fetal Kidney kidney
33 chr6:163775800-163776400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
34 chr6:163775800-163776600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr6:163775800-163776800 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr6:163775800-163776800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
37 chr6:163775800-163776800 Enhancers Esophagus oesophagus
38 chr6:163775800-163776800 Active TSS Rectal Smooth Muscle rectum
39 chr6:163775800-163777000 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr6:163775800-163777200 Enhancers Primary hematopoietic stem cells blood
41 chr6:163775800-163777200 Flanking Active TSS Osteobl bone
42 chr6:163775800-163777400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:163775800-163777400 Flanking Active TSS Adipose Nuclei Adipose
44 chr6:163775800-163777400 Flanking Active TSS Brain Anterior Caudate brain
45 chr6:163775800-163777400 Enhancers GM12878-XiMat blood
46 chr6:163775800-163777400 Flanking Active TSS HUVEC blood vessel
47 chr6:163775800-163777600 Enhancers HUES48 Cell Line embryonic stem cell
48 chr6:163775800-163777600 Enhancers Primary B cells from peripheral blood blood
49 chr6:163775800-163778000 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr6:163775800-163778000 Enhancers Left Ventricle heart

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