Variant report

Variant	rs9373053
Chromosome Location	chr6:133756705-133756706
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1012605	0.93[EUR][1000 genomes]
rs1336534	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1889946	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1889947	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1926090	0.82[CEU][hapmap]
rs1932748	0.92[ASN][1000 genomes]
rs6907872	0.88[CEU][hapmap];0.80[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6912844	0.85[YRI][hapmap]
rs760861	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133732600-133758200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:133749800-133777600	Weak transcription	Hela-S3	cervix
3	chr6:133752400-133763400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:133753800-133757800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:133753800-133757800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr6:133753800-133758000	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr6:133755800-133756800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:133756000-133756800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr6:133756200-133756800	Enhancers	Brain Substantia Nigra	brain
10	chr6:133756400-133756800	Enhancers	Fetal Muscle Leg	muscle
11	chr6:133756400-133756800	Enhancers	Left Ventricle	heart
12	chr6:133756400-133756800	Enhancers	Right Atrium	heart
13	chr6:133756400-133756800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
14	chr6:133756400-133756800	Enhancers	Spleen	Spleen
15	chr6:133756400-133757000	Flanking Active TSS	Liver	Liver
16	chr6:133756400-133757000	Enhancers	HSMMtube	muscle
17	chr6:133756400-133757200	Enhancers	Psoas Muscle	Psoas
18	chr6:133756600-133757400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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