The 2.0 version of rSNPBase

Variant report

Variant rs9374665
Chromosome Location chr6:117830317-117830318
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:117805200-117851200 Weak transcription Right Ventricle heart
2 chr6:117816400-117841400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:117818400-117833600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr6:117819800-117831600 Weak transcription Hela-S3 cervix
5 chr6:117819800-117834200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr6:117819800-117868800 Weak transcription Spleen Spleen
7 chr6:117821600-117868800 Weak transcription Rectal Smooth Muscle rectum
8 chr6:117821800-117843600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:117823200-117868800 Weak transcription Stomach Smooth Muscle stomach
10 chr6:117823200-117869600 Weak transcription Small Intestine intestine
11 chr6:117823600-117830800 Weak transcription Brain Angular Gyrus brain
12 chr6:117825400-117833400 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr6:117826200-117842600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr6:117826200-117844800 Weak transcription Fetal Muscle Trunk muscle
15 chr6:117826400-117859800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr6:117826600-117833400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr6:117827000-117834200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr6:117827200-117841600 Weak transcription Adipose Nuclei Adipose
19 chr6:117827600-117851200 Weak transcription Lung lung
20 chr6:117827800-117831200 Weak transcription GM12878-XiMat blood
21 chr6:117828000-117830400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:117828000-117830400 Enhancers Fetal Lung lung
23 chr6:117828000-117832000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:117828000-117833600 Weak transcription Aorta Aorta
25 chr6:117828000-117833600 Weak transcription Gastric stomach
26 chr6:117828000-117834400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr6:117828000-117834400 Weak transcription Psoas Muscle Psoas
28 chr6:117828000-117836400 Weak transcription Liver Liver
29 chr6:117828000-117841400 Weak transcription Left Ventricle heart
30 chr6:117828000-117866200 Weak transcription Esophagus oesophagus
31 chr6:117828200-117841000 Weak transcription Duodenum Mucosa Duodenum
32 chr6:117828200-117851000 Weak transcription Right Atrium heart
33 chr6:117828400-117834400 Weak transcription HSMMtube muscle
34 chr6:117828400-117851600 Weak transcription NHLF lung
35 chr6:117828600-117833400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:117828600-117833800 Weak transcription Fetal Kidney kidney
37 chr6:117828800-117834000 Strong transcription HSMM muscle
38 chr6:117829000-117830400 Strong transcription Fetal Intestine Large intestine
39 chr6:117829000-117832000 Strong transcription Muscle Satellite Cultured Cells --
40 chr6:117829000-117832200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr6:117829000-117833000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:117829000-117833000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:117829000-117833400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr6:117829000-117834600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr6:117829400-117830800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr6:117829400-117831400 Strong transcription Osteobl bone
47 chr6:117829400-117832000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr6:117829400-117832200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:117829600-117831000 Enhancers HMEC breast
50 chr6:117829600-117832200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015