Variant report

Variant	rs9379013
Chromosome Location	chr6:6161313-6161314
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1871970	0.84[CHB][hapmap];0.82[CHD][hapmap];0.86[JPT][hapmap];0.82[MEX][hapmap];0.85[ASN][1000 genomes]
rs2326705	0.84[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs2326708	0.84[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs3024454	0.84[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs3778359	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];0.96[GIH][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap];0.91[TSI][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs900402	0.83[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.86[TSI][hapmap];0.91[ASN][1000 genomes]
rs9392751	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];0.96[GIH][hapmap];0.86[JPT][hapmap];0.95[TSI][hapmap];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9392752	1.00[ASW][hapmap];1.00[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9504695	0.86[JPT][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:6144000-6163600	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr6:6145000-6179800	Weak transcription	HSMM	muscle
3	chr6:6146800-6200400	Weak transcription	Placenta	Placenta
4	chr6:6158800-6165400	Weak transcription	HSMMtube	muscle
5	chr6:6160200-6164200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr6:6160400-6168400	Weak transcription	Adipose Nuclei	Adipose
7	chr6:6160800-6163000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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