Variant report
| Variant | rs9386798 |
|---|---|
| Chromosome Location | chr6:109639971-109639972 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:109629600-109654000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr6:109634200-109641200 | Enhancers | Fetal Muscle Leg | muscle |
| 3 | chr6:109634400-109644000 | Weak transcription | Spleen | Spleen |
| 4 | chr6:109635200-109641200 | Enhancers | Brain Hippocampus Middle | brain |
| 5 | chr6:109635600-109646600 | Weak transcription | HSMMtube | muscle |
| 6 | chr6:109636200-109641800 | Enhancers | Fetal Intestine Large | intestine |
| 7 | chr6:109636200-109642000 | Enhancers | Fetal Intestine Small | intestine |
| 8 | chr6:109636400-109641200 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 9 | chr6:109637000-109640200 | Weak transcription | Fetal Kidney | kidney |
| 10 | chr6:109637400-109649800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr6:109637800-109640600 | Enhancers | Liver | Liver |
| 12 | chr6:109637800-109640600 | Enhancers | Brain Angular Gyrus | brain |
| 13 | chr6:109637800-109640800 | Enhancers | Fetal Thymus | thymus |
| 14 | chr6:109638000-109640800 | Enhancers | Brain Substantia Nigra | brain |
| 15 | chr6:109638200-109644000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 16 | chr6:109638400-109640600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 17 | chr6:109638400-109641800 | Enhancers | Stomach Mucosa | stomach |
| 18 | chr6:109638400-109645400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 19 | chr6:109638600-109640600 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 20 | chr6:109638800-109640800 | Enhancers | Fetal Muscle Trunk | muscle |
| 21 | chr6:109638800-109641000 | Enhancers | Thymus | Thymus |
| 22 | chr6:109639000-109640200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr6:109639000-109640600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 24 | chr6:109639000-109640800 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr6:109639200-109640000 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 26 | chr6:109639200-109640200 | Weak transcription | Small Intestine | intestine |
| 27 | chr6:109639200-109640200 | Flanking Active TSS | HepG2 | liver |
| 28 | chr6:109639200-109640400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr6:109639200-109640600 | Enhancers | Pancreas | Pancrea |
| 30 | chr6:109639200-109640800 | Enhancers | Primary hematopoietic stem cells | blood |
| 31 | chr6:109639400-109640600 | Enhancers | K562 | blood |
| 32 | chr6:109639600-109640200 | Enhancers | Gastric | stomach |
| 33 | chr6:109639600-109640400 | Flanking Active TSS | Skeletal Muscle Male | skeletal muscle |
| 34 | chr6:109639600-109640400 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 35 | chr6:109639600-109640400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 36 | chr6:109639600-109640600 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 37 | chr6:109639600-109640600 | Enhancers | Left Ventricle | heart |
| 38 | chr6:109639600-109640600 | Enhancers | Psoas Muscle | Psoas |
| 39 | chr6:109639600-109641400 | Enhancers | Fetal Heart | heart |
| 40 | chr6:109639800-109640000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 41 | chr6:109639800-109640000 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 42 | chr6:109639800-109640000 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 43 | chr6:109639800-109640200 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr6:109639800-109640200 | Enhancers | Primary B cells from peripheral blood | blood |
| 45 | chr6:109639800-109640200 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 46 | chr6:109639800-109640200 | Flanking Active TSS | Colonic Mucosa | Colon |
| 47 | chr6:109639800-109640200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 48 | chr6:109639800-109640400 | Enhancers | Primary B cells from cord blood | blood |
| 49 | chr6:109639800-109640400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 50 | chr6:109639800-109640600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
