Variant report

Variant	rs9390471
Chromosome Location	chr6:147827646-147827647
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12234160	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9377052	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9377053	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9377055	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9390470	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9390472	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9399604	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9403858	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9485188	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9485189	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485190	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485191	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485192	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485194	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9497792	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147821000-147827800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:147825200-147827800	Weak transcription	Brain Germinal Matrix	brain
3	chr6:147827400-147827800	Enhancers	HSMM	muscle
4	chr6:147827600-147827800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:147827600-147827800	Enhancers	Fetal Kidney	kidney
6	chr6:147827600-147827800	Weak transcription	Right Atrium	heart
7	chr6:147827600-147828000	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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