Variant report

Variant rs9485192
Chromosome Location chr6:147831468-147831469
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:147827800-147831800 Active TSS Pancreatic Islets Pancreatic Islet
2 chr6:147827800-147834000 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr6:147828400-147832400 Active TSS Fetal Kidney kidney
4 chr6:147828600-147831600 Active TSS HSMM muscle
5 chr6:147828600-147832000 Active TSS Fetal Intestine Large intestine
6 chr6:147828600-147832000 Active TSS Rectal Mucosa Donor 31 rectum
7 chr6:147828600-147832200 Active TSS HSMMtube muscle
8 chr6:147828800-147831600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr6:147828800-147831600 Active TSS Lung lung
10 chr6:147828800-147831800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
11 chr6:147828800-147832200 Active TSS Muscle Satellite Cultured Cells --
12 chr6:147828800-147832200 Active TSS Brain Inferior Temporal Lobe brain
13 chr6:147828800-147832400 Active TSS Fetal Intestine Small intestine
14 chr6:147828800-147832600 Active TSS Brain Anterior Caudate brain
15 chr6:147829400-147832400 Bivalent/Poised TSS Fetal Brain Female brain
16 chr6:147829600-147831600 Active TSS Colonic Mucosa Colon
17 chr6:147830000-147831600 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:147830000-147831800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:147830400-147831600 Flanking Active TSS Ovary ovary
20 chr6:147830400-147832000 Flanking Active TSS HUVEC blood vessel
21 chr6:147830600-147832600 Bivalent Enhancer HepG2 liver
22 chr6:147830800-147831600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr6:147830800-147831600 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
24 chr6:147830800-147831800 Active TSS Fetal Stomach stomach
25 chr6:147830800-147832200 Bivalent/Poised TSS Placenta Placenta
26 chr6:147831000-147831600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:147831000-147832200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr6:147831000-147832600 Flanking Active TSS Liver Liver
29 chr6:147831000-147832600 Flanking Active TSS Fetal Lung lung
30 chr6:147831000-147832600 Active TSS Rectal Mucosa Donor 29 rectum
31 chr6:147831200-147831600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:147831200-147831600 Bivalent Enhancer Fetal Muscle Leg muscle
33 chr6:147831200-147831600 Flanking Bivalent TSS/Enh Stomach Mucosa stomach
34 chr6:147831200-147831600 Flanking Bivalent TSS/Enh HMEC breast
35 chr6:147831200-147832600 Bivalent/Poised TSS Fetal Brain Male brain
36 chr6:147831400-147831600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
37 chr6:147831400-147831600 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr6:147831400-147831600 Flanking Active TSS Right Ventricle heart
39 chr6:147831400-147831600 Weak transcription A549 lung
40 chr6:147831400-147831800 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr6:147831400-147831800 Flanking Bivalent TSS/Enh hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr6:147831400-147832400 Active TSS NHLF lung
43 chr6:147831400-147832600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr6:147831400-147836400 Weak transcription Rectal Smooth Muscle rectum
45 chr6:147831400-147838800 Weak transcription Esophagus oesophagus

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