Variant report

Variant	rs9399417
Chromosome Location	chr6:143369797-143369798
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs17072160	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1855558	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4896612	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4896620	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57181177	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58257035	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60517501	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73777854	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73777862	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73777863	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73777864	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73777865	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9399418	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143356800-143377000	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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