Variant report

Variant	rs9399471
Chromosome Location	chr6:144466072-144466073
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs12174731	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386060	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9390157	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9496879	0.82[EUR][1000 genomes]
rs9496880	0.82[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144463000-144470600	Weak transcription	GM12878-XiMat	blood
2	chr6:144463200-144470600	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr6:144464000-144466600	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:144465600-144466200	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr6:144465600-144467000	Enhancers	HUVEC	blood vessel
6	chr6:144465800-144466600	Enhancers	NHEK	skin
7	chr6:144466000-144467400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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