Variant report
Variant | rs9443212 |
---|---|
Chromosome Location | chr6:76875530-76875531 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10046105 | 0.93[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs10498905 | 0.93[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs16887144 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs7739776 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs7756681 | 0.90[ASN][1000 genomes] |
rs7759973 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs7769591 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs9443211 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9443213 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9443215 | 0.93[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9447615 | 0.93[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs9447632 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9447633 | 0.93[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9447639 | 0.93[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9447641 | 0.93[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs9447642 | 0.93[AMR][1000 genomes];0.95[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv932201 | chr6:76365548-77219650 | Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 20 gene(s) | inside rSNPs | diseases |
2 | nsv1028340 | chr6:76410921-76960225 | Flanking Bivalent TSS/Enh Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 18 gene(s) | inside rSNPs | diseases |
3 | nsv538319 | chr6:76410921-76960225 | Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 18 gene(s) | inside rSNPs | diseases |
4 | nsv1027202 | chr6:76732883-76960225 | Enhancers Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
5 | nsv1028764 | chr6:76870971-77145573 | Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:76875400-76875600 | Enhancers | Pancreas | Pancrea |