Variant report

Variant	rs9455445
Chromosome Location	chr6:72081021-72081022
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10498878	0.89[EUR][1000 genomes]
rs1192041	0.85[AFR][1000 genomes]
rs13208791	0.89[EUR][1000 genomes]
rs13220674	0.89[EUR][1000 genomes]
rs1322762	0.92[EUR][1000 genomes]
rs1358381	0.89[EUR][1000 genomes]
rs16881149	0.89[EUR][1000 genomes]
rs16881155	0.89[EUR][1000 genomes]
rs16881181	0.89[EUR][1000 genomes]
rs1852580	0.89[EUR][1000 genomes]
rs2146370	0.89[EUR][1000 genomes]
rs33999954	0.89[EUR][1000 genomes]
rs34137300	0.89[EUR][1000 genomes]
rs34436988	0.89[EUR][1000 genomes]
rs35519429	0.89[EUR][1000 genomes]
rs701695	0.82[AFR][1000 genomes]
rs828639	0.82[AFR][1000 genomes]
rs9455448	0.89[EUR][1000 genomes]
rs9455449	0.89[EUR][1000 genomes]
rs9455450	0.89[EUR][1000 genomes]

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72061600-72097000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr6:72070200-72081400	Weak transcription	Hela-S3	cervix
3	chr6:72071400-72085200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr6:72071600-72083600	Weak transcription	Placenta	Placenta
5	chr6:72075400-72087200	Weak transcription	Fetal Heart	heart
6	chr6:72076000-72083800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr6:72076000-72084000	Weak transcription	Fetal Intestine Small	intestine
8	chr6:72076000-72093400	Weak transcription	Brain Hippocampus Middle	brain
9	chr6:72076200-72083800	Weak transcription	NH-A	brain
10	chr6:72076200-72103200	Weak transcription	Aorta	Aorta
11	chr6:72076600-72083400	Weak transcription	Adipose Nuclei	Adipose
12	chr6:72076600-72087600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr6:72076600-72090200	Weak transcription	Ovary	ovary
14	chr6:72077000-72084000	Weak transcription	Stomach Smooth Muscle	stomach
15	chr6:72077200-72081800	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr6:72077400-72081200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr6:72077600-72084000	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr6:72077600-72085400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:72077600-72093400	Weak transcription	Brain Anterior Caudate	brain
20	chr6:72077600-72094800	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr6:72077800-72083800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr6:72077800-72087800	Weak transcription	Right Ventricle	heart
23	chr6:72077800-72088000	Weak transcription	Left Ventricle	heart
24	chr6:72077800-72093000	Weak transcription	Lung	lung
25	chr6:72077800-72093200	Weak transcription	Pancreas	Pancrea
26	chr6:72077800-72097000	Weak transcription	Psoas Muscle	Psoas
27	chr6:72077800-72097200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:72078000-72083800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr6:72078200-72081400	Weak transcription	HUVEC	blood vessel
30	chr6:72078200-72084000	Weak transcription	NHDF-Ad	bronchial
31	chr6:72078200-72095400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr6:72078400-72083600	Weak transcription	A549	lung
33	chr6:72078400-72083800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr6:72078600-72081200	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr6:72078800-72081200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
36	chr6:72078800-72083800	Weak transcription	NHEK	skin
37	chr6:72079400-72082000	Strong transcription	Cortex derived primary cultured neurospheres	brain
38	chr6:72079400-72082400	Strong transcription	HMEC	breast
39	chr6:72079600-72082000	Strong transcription	Fetal Kidney	kidney
40	chr6:72079800-72082800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr6:72079800-72098800	Weak transcription	Brain Substantia Nigra	brain
42	chr6:72080200-72082600	Strong transcription	Osteobl	bone
43	chr6:72080200-72083400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr6:72080400-72081200	Strong transcription	HSMMtube	muscle
45	chr6:72080400-72082200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr6:72080400-72082400	Strong transcription	Liver	Liver
47	chr6:72080400-72084400	Strong transcription	HSMM	muscle
48	chr6:72080600-72082200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr6:72081000-72082400	Strong transcription	Fetal Lung	lung
50	chr6:72081000-72082600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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