Variant report
Variant | rs9459215 |
---|---|
Chromosome Location | chr6:165268463-165268464 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1511069 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1511070 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1511071 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1511072 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2063427 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2063428 | 0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs34309175 | 0.85[ASN][1000 genomes] |
rs4506023 | 0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs4569942 | 0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs4639310 | 0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs6455968 | 0.83[AFR][1000 genomes];0.82[ASN][1000 genomes] |
rs6902206 | 0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7356835 | 0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7356875 | 0.80[EUR][1000 genomes] |
rs7768607 | 0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1029952 | chr6:164463355-165268911 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
2 | nsv605232 | chr6:164994771-165401154 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv830862 | chr6:165132822-165311086 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:165268400-165269000 | Weak transcription | Ovary | ovary |