Variant report

Variant rs9461419
Chromosome Location chr6:27859824-27859825
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27857000-27863400 Active TSS Thymus Thymus
2 chr6:27857000-27863800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:27857200-27863800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:27857200-27864000 Active TSS H9 Cell Line embryonic stem cell
5 chr6:27857200-27864000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:27857200-27864000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
7 chr6:27857400-27860000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:27857400-27864000 Active TSS HUES48 Cell Line embryonic stem cell
9 chr6:27857400-27864400 Active TSS H1 Cell Line embryonic stem cell
10 chr6:27857400-27864400 Active TSS iPS-20b Cell Line embryonic stem cell
11 chr6:27857600-27861000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:27857600-27864000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr6:27857800-27861000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr6:27857800-27863600 Active TSS iPS-18 Cell Line embryonic stem cell
15 chr6:27857800-27863800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr6:27857800-27864000 Active TSS A549 lung
17 chr6:27858000-27860200 Active TSS Fetal Brain Female brain
18 chr6:27858000-27860800 Flanking Active TSS Primary hematopoietic stem cells blood
19 chr6:27858000-27863600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:27858000-27863600 Active TSS HUES6 Cell Line embryonic stem cell
21 chr6:27858000-27863600 Active TSS Fetal Lung lung
22 chr6:27858000-27864000 Active TSS ES-I3 Cell Line embryonic stem cell
23 chr6:27858000-27864000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr6:27858200-27863600 Active TSS Fetal Intestine Large intestine
25 chr6:27858200-27863800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:27858200-27863800 Active TSS Brain Germinal Matrix brain
27 chr6:27858200-27864000 Active TSS NHLF lung
28 chr6:27858200-27864200 Active TSS Fetal Kidney kidney
29 chr6:27858400-27860000 Active TSS Placenta Placenta
30 chr6:27858400-27863600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr6:27858400-27863600 Active TSS NH-A brain
32 chr6:27858400-27863800 Active TSS NHDF-Ad bronchial
33 chr6:27858400-27864200 Active TSS K562 blood
34 chr6:27858600-27860000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr6:27858600-27860200 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr6:27858600-27860200 Weak transcription Liver Liver
37 chr6:27858600-27860200 Active TSS Rectal Mucosa Donor 31 rectum
38 chr6:27858600-27860200 Active TSS HMEC breast
39 chr6:27858600-27860400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:27858600-27860400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr6:27858600-27860400 Weak transcription Pancreas Pancrea
42 chr6:27858600-27860400 Active TSS Rectal Mucosa Donor 29 rectum
43 chr6:27858600-27860400 Weak transcription Stomach Mucosa stomach
44 chr6:27858600-27860600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
45 chr6:27858600-27860600 Weak transcription Gastric stomach
46 chr6:27858600-27862400 Active TSS Colonic Mucosa Colon
47 chr6:27858600-27863200 Active TSS NHEK skin
48 chr6:27858600-27863600 Active TSS Dnd41 blood
49 chr6:27858600-27864000 Active TSS Muscle Satellite Cultured Cells --
50 chr6:27858800-27860400 Enhancers Fetal Brain Male brain

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