Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10456325	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12195457	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12201249	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12216281	0.93[ASN][1000 genomes]
rs1410443	0.81[EUR][1000 genomes]
rs1883257	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1884575	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs212929	0.82[EUR][1000 genomes]
rs212935	0.82[EUR][1000 genomes]
rs212939	0.81[EUR][1000 genomes]
rs453181	0.80[EUR][1000 genomes]
rs6913169	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6918563	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72840515	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72840523	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72840524	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs72840525	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7741026	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9461190	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9467555	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883488	chr6:25592489-25731691	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:25622800-25634800	Weak transcription	Fetal Intestine Small	intestine
2	chr6:25629000-25638200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:25630200-25640800	Weak transcription	Pancreas	Pancrea
4	chr6:25632000-25634400	Weak transcription	HepG2	liver
5	chr6:25632000-25637200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr6:25632000-25638400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:25632200-25634400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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