Variant report

Variant	rs9468821
Chromosome Location	chr6:30712298-30712299
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:491)
CpG islands
(count:61)
Chromatin interactive
region (count:66)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:491 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:30711441-30712488	GM12891	blood:	n/a	n/a
2	ELF1	chr6:30711400-30712745	GM12878	blood:	n/a	n/a
3	POLR2A	chr6:30711451-30712582	A549	lung:	n/a	n/a
4	POLR2A	chr6:30710032-30712587	K562	blood:	n/a	n/a
5	MAX	chr6:30712073-30712646	A549	lung:	n/a	n/a
6	REST	chr6:30711975-30712606	K562	blood:	n/a	chr6:30712386-30712404 chr6:30712388-30712401
7	SMARCB1	chr6:30707405-30712696	Hela-S3	cervix:	n/a	n/a
8	USF2	chr6:30712118-30712353	H1-hESC	embryonic stem cell:	n/a	chr6:30712323-30712339
9	GTF2F1	chr6:30712092-30712600	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr6:30711852-30712557	SK-N-SH	brain:	n/a	n/a
11	SP1	chr6:30712065-30712687	HepG2	liver:	n/a	chr6:30712384-30712395
12	IRF1	chr6:30712047-30712562	K562	blood:	n/a	n/a
13	TBL1XR1	chr6:30711974-30712552	K562	blood:	n/a	n/a
14	MAFK	chr6:30712149-30712452	HepG2	liver:	n/a	n/a
15	POLR2A	chr6:30709183-30712741	K562	blood:	n/a	n/a
16	POLR2A	chr6:30709565-30712522	GM18505	blood:	n/a	n/a
17	CTCF	chr6:30711893-30712378	K562	blood:	n/a	n/a
18	REST	chr6:30711807-30712528	HepG2	liver:	n/a	chr6:30712386-30712404 chr6:30712388-30712401
19	BCL3	chr6:30712154-30712655	GM12878	blood:	n/a	n/a
20	CBX3	chr6:30711803-30712681	K562	blood:	n/a	n/a
21	ZBTB7A	chr6:30711961-30712510	K562	blood:	n/a	n/a
22	POLR2A	chr6:30704670-30712656	Hela-S3	cervix:	n/a	n/a
23	JUND	chr6:30712194-30712368	H1-hESC	embryonic stem cell:	n/a	n/a
24	POLR2A	chr6:30708838-30712666	HUVEC	blood vessel:	n/a	n/a
25	EP300	chr6:30711901-30712639	A549	lung:	n/a	chr6:30712448-30712461
26	RAD21	chr6:30711895-30712573	MCF-7	breast:	n/a	chr6:30712416-30712429 chr6:30712391-30712405
27	JUND	chr6:30712234-30712507	HepG2	liver:	n/a	n/a
28	POLR2A	chr6:30708868-30712745	HCT-116	colon:	n/a	n/a
29	PAX5	chr6:30711889-30712581	GM12878	blood:	n/a	n/a
30	RAD21	chr6:30711991-30712347	K562	blood:	n/a	n/a
31	TBL1XR1	chr6:30711920-30712543	K562	blood:	n/a	n/a
32	FOXP2	chr6:30712179-30712426	SK-N-MC	brain:	n/a	n/a
33	POLR2A	chr6:30711856-30712546	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr6:30712057-30712330	HepG2	liver:	n/a	n/a
35	RELA	chr6:30712004-30712626	GM18951	blood:	n/a	chr6:30712428-30712437 chr6:30712428-30712437
36	EP300	chr6:30711834-30712583	GM12878	blood:	n/a	chr6:30712448-30712461
37	POU2F2	chr6:30711923-30712584	GM12891	blood:	n/a	n/a
38	POLR2A	chr6:30707434-30712732	PANC-1	pancreas:	n/a	n/a
39	ZNF143	chr6:30711977-30712559	GM12878	blood:	n/a	n/a
40	RCOR1	chr6:30712062-30712613	HepG2	liver:	n/a	n/a
41	EP300	chr6:30711992-30712582	HepG2	liver:	n/a	chr6:30712448-30712461
42	MYC	chr6:30712162-30712657	H1-hESC	embryonic stem cell:	n/a	n/a
43	POLR2A	chr6:30707893-30713121	HepG2	liver:	n/a	n/a
44	TAF7	chr6:30712015-30712518	H1-hESC	embryonic stem cell:	n/a	n/a
45	MYBL2	chr6:30709493-30712702	HepG2	liver:	n/a	n/a
46	RAD21	chr6:30709386-30712657	HCT-116	colon:	n/a	chr6:30712416-30712429 chr6:30710226-30710239 chr6:30712391-30712405
47	SIN3AK20	chr6:30711724-30712607	PANC-1	pancreas:	n/a	n/a
48	ZBTB7A	chr6:30712021-30712473	HepG2	liver:	n/a	n/a
49	ELF1	chr6:30711895-30712579	GM12878	blood:	n/a	n/a
50	SIN3AK20	chr6:30709484-30712745	HCT-116	colon:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:30712282-30712332	MCF-7	breast:	n/a
2	chr6:30712282-30712332	SK-N-SH	brain:	n/a
3	chr6:30712282-30712332	SK-N-MC	brain:	n/a
4	chr6:30712282-30712332	HCF	heart:	n/a
5	chr6:30712282-30712332	HEEpiC	esophagus:	n/a
6	chr6:30712282-30712332	GM06990	blood:	n/a
7	chr6:30712282-30712332	PANC-1	pancreas:	n/a
8	chr6:30712282-30712332	Caco-2	colon:	n/a
9	chr6:30712282-30712332	HL-60	blood:	n/a
10	chr6:30712282-30712332	HEK293	kidney:	embryo
11	chr6:30712282-30712332	T-47D	breast:	n/a
12	chr6:30712282-30712332	HepG2	liver:	n/a
13	chr6:30712282-30712332	Hepatocyte	liver:	n/a
14	chr6:30712282-30712332	ovcar-3	ovarian:	n/a
15	chr6:30712282-30712332	AG09309	skin:	n/a
16	chr6:30712282-30712332	GM12891	blood:	n/a
17	chr6:30712282-30712332	SKMC	muscle:	n/a
18	chr6:30712282-30712332	K562	blood:	n/a
19	chr6:30712282-30712332	PFSK-1	brain:	n/a
20	chr6:30712282-30712332	HRPEpiC	eye:	n/a
21	chr6:30712282-30712332	RPTEC	kidney:	n/a
22	chr6:30712282-30712332	BE2_C	brain:	n/a
23	chr6:30712282-30712332	NT2-D1	testis:	n/a
24	chr6:30712282-30712332	HRE	kidney:	n/a
25	chr6:30712282-30712332	MCF10A-Er-Src	breast:	n/a
26	chr6:30712282-30712332	SK-N-SH_RA	brain:	n/a
27	chr6:30712282-30712332	HMEC	breast:	n/a
28	chr6:30712282-30712332	GM12892	blood:	n/a
29	chr6:30712282-30712332	Jurkat	blood:	n/a
30	chr6:30712282-30712332	NH-A	brain:	n/a
31	chr6:30712282-30712332	Hela-S3	cervix:	n/a
32	chr6:30712282-30712332	SAEC	small airway:	n/a
33	chr6:30712282-30712332	H1-hESC	embryonic stem cell:	embryo
34	chr6:30712282-30712332	HIPEpiC	eye:	n/a
35	chr6:30712282-30712332	HNPCEpiC	eye:	n/a
36	chr6:30712282-30712332	GM19239	blood:	n/a
37	chr6:30712282-30712332	U87	brain:	n/a
38	chr6:30712282-30712332	GM12878	blood:	n/a
39	chr6:30712282-30712332	HCPEpiC	choroid plexus:	n/a
40	chr6:30712282-30712332	BJ	skin:	n/a
41	chr6:30712282-30712332	HCM	heart:	n/a
42	chr6:30712282-30712332	AG04449	skin:	fetal
43	chr6:30712282-30712332	NB4	blood:	n/a
44	chr6:30712282-30712332	AG09319	gingival:	n/a
45	chr6:30712282-30712332	AoSMC	blood vessel:	n/a
46	chr6:30712282-30712332	HAEpiC	amniotic membrane:	n/a
47	chr6:30712282-30712332	NHDF-neo	bronchial:	n/a
48	chr6:30712282-30712332	HPAEpiC	pulmonary alveolar:	n/a
49	chr6:30712282-30712332	LNCaP	prostate:	n/a
50	chr6:30712282-30712332	PrEC	prostate:	n/a

(count:66 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:29508017..29508754-chr6:30712061..30712704,2	Hela-S3	cervix:
2	chr6:30707945..30712505-chr6:30840794..30847673,9	K562	blood:
3	chr5:153417075..153419525-chr6:30710164..30712570,2	MCF-7	breast:
4	chr17:6544033..6544684-chr6:30711943..30712591,2	Hela-S3	cervix:
5	chr1:204380394..204381296-chr6:30711937..30712762,2	Hela-S3	cervix:
6	chr6:30710580..30713200-chr6:30873655..30875872,3	K562	blood:
7	chr6:30571335..30573334-chr6:30711014..30713155,2	K562	blood:
8	chr6:30581322..30587794-chr6:30705649..30714068,32	K562	blood:
9	chr1:150334379..150337370-chr6:30710721..30713568,2	MCF-7	breast:
10	chr6:30703666..30722133-chr6:30776009..30801352,184	MCF-7	breast:
11	chr16:12070320..12071169-chr6:30711924..30712484,2	Hela-S3	cervix:
12	chr6:30521586..30526375-chr6:30710310..30712965,5	MCF-7	breast:
13	chr4:2936215..2937210-chr6:30712290..30712902,2	Hela-S3	cervix:
14	chr17:33569427..33570386-chr6:30711621..30712416,2	Hela-S3	cervix:
15	chr6:30537817..30539494-chr6:30709502..30712304,2	K562	blood:
16	chr6:30514422..30516321-chr6:30710847..30712439,2	MCF-7	breast:
17	chr6:30639079..30642784-chr6:30705636..30712325,12	MCF-7	breast:
18	chr11:62599341..62599934-chr6:30711516..30712495,2	Hela-S3	cervix:
19	chr6:30710692..30712313-chr6:30853038..30855427,2	K562	blood:
20	chr1:212209024..212209539-chr6:30711862..30712775,2	Hela-S3	cervix:
21	chr5:10250399..10250943-chr6:30711782..30712586,2	Hela-S3	cervix:
22	chr1:153962819..153963585-chr6:30712022..30712674,2	Hela-S3	cervix:
23	chr11:76155162..76155791-chr6:30711728..30712371,2	Hela-S3	cervix:
24	chr6:30710148..30713140-chr6:30864096..30868029,4	MCF-7	breast:
25	chr6:26158313..26158816-chr6:30711943..30712757,2	Hela-S3	cervix:
26	chr6:30707481..30713943-chr6:30872979..30880006,10	MCF-7	breast:
27	chr1:153935774..153936280-chr6:30711788..30712324,2	Hela-S3	cervix:
28	chr1:144931658..144932278-chr6:30711843..30712705,2	HCT-116	colon:
29	chr6:30712045..30712767-chr7:100026662..100027338,2	Hela-S3	cervix:
30	chr6:30578948..30585851-chr6:30707403..30713755,14	MCF-7	breast:
31	chr6:30705171..30717521-chr6:30843972..30856100,74	MCF-7	breast:
32	chr10:99496529..99497087-chr6:30711089..30712462,3	Hela-S3	cervix:
33	chr1:45265336..45266309-chr6:30711836..30712356,2	Hela-S3	cervix:
34	chr6:30709801..30712369-chr9:116163469..116165342,2	MCF-7	breast:
35	chr6:30580645..30587403-chr6:30708153..30714600,16	MCF-7	breast:
36	chr1:156182723..156183511-chr6:30712190..30712805,2	Hela-S3	cervix:
37	chr6:30704403..30722478-chr6:30842859..30858629,100	MCF-7	breast:
38	chr6:26033399..26033929-chr6:30711798..30712759,2	Hela-S3	cervix:
39	chr16:4817202..4817785-chr6:30712000..30712525,2	Hela-S3	cervix:
40	chr12:107486849..107487536-chr6:30711792..30712375,2	HCT-116	colon:
41	chr6:30710804..30712449-chr6:33376908..33379450,2	MCF-7	breast:
42	chr2:73510999..73511513-chr6:30711614..30712566,2	Hela-S3	cervix:
43	chr1:11967958..11968459-chr6:30711434..30712378,2	HCT-116	colon:
44	chr20:39657198..39657713-chr6:30711987..30712621,2	HCT-116	colon:
45	chr6:30703055..30723531-chr6:30783853..30800217,151	MCF-7	breast:
46	chr17:57918223..57923763-chr6:30707801..30713436,10	MCF-7	breast:
47	chr19:488927..489517-chr6:30711807..30712804,2	Hela-S3	cervix:
48	chr4:40056827..40059245-chr6:30710214..30712431,2	MCF-7	breast:
49	chr19:10764295..10765252-chr6:30711615..30712349,2	Hela-S3	cervix:
50	chr6:30710424..30713995-chr6:30746295..30752430,9	K562	blood:

No data

Variant related genes	Relation type
FLOT1	TF binding region
FLOT1	CpG island
ENSG00000062725	Chromatin interaction
ENSG00000266947	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000163013	Chromatin interaction
ENSG00000055147	Chromatin interaction
ENSG00000143570	Chromatin interaction
ENSG00000037749	Chromatin interaction
ENSG00000112511	Chromatin interaction
ENSG00000148218	Chromatin interaction
ENSG00000264731	Chromatin interaction
ENSG00000143476	Chromatin interaction
ENSG00000177954	Chromatin interaction
ENSG00000166750	Chromatin interaction
ENSG00000135185	Chromatin interaction
ENSG00000205794	Chromatin interaction
ENSG00000118515	Chromatin interaction
ENSG00000134575	Chromatin interaction
ENSG00000260238	Chromatin interaction
ENSG00000213780	Chromatin interaction
ENSG00000256690	Chromatin interaction
ENSG00000196449	Chromatin interaction
ENSG00000165458	Chromatin interaction
ENSG00000237775	Chromatin interaction
ENSG00000214894	Chromatin interaction
ENSG00000116350	Chromatin interaction
ENSG00000103199	Chromatin interaction
ENSG00000158373	Chromatin interaction
ENSG00000143367	Chromatin interaction
ENSG00000150753	Chromatin interaction
ENSG00000137628	Chromatin interaction
ENSG00000249673	Chromatin interaction
ENSG00000167468	Chromatin interaction
ENSG00000100219	Chromatin interaction
ENSG00000137259	Chromatin interaction
ENSG00000129235	Chromatin interaction
ENSG00000199347	Chromatin interaction
ENSG00000228022	Chromatin interaction
ENSG00000154945	Chromatin interaction
ENSG00000204580	Chromatin interaction
ENSG00000178104	Chromatin interaction
ENSG00000197982	Chromatin interaction
ENSG00000234719	Chromatin interaction
ENSG00000186017	Chromatin interaction
ENSG00000173846	Chromatin interaction
ENSG00000222894	Chromatin interaction
ENSG00000137411	Chromatin interaction
ENSG00000257548	Chromatin interaction
ENSG00000267309	Chromatin interaction
ENSG00000232536	Chromatin interaction
ENSG00000163125	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000048471	Chromatin interaction
ENSG00000099866	Chromatin interaction
ENSG00000204576	Chromatin interaction
ENSG00000146834	Chromatin interaction
ENSG00000267100	Chromatin interaction
ENSG00000008405	Chromatin interaction
ENSG00000146112	Chromatin interaction
ENSG00000109736	Chromatin interaction
ENSG00000204590	Chromatin interaction
ENSG00000204568	Chromatin interaction
ENSG00000129351	Chromatin interaction
ENSG00000204574	Chromatin interaction
ENSG00000255135	Chromatin interaction
ENSG00000204569	Chromatin interaction
ENSG00000158615	Chromatin interaction
ENSG00000204560	Chromatin interaction
ENSG00000155256	Chromatin interaction
ENSG00000162236	Chromatin interaction
ENSG00000078177	Chromatin interaction
ENSG00000198920	Chromatin interaction
ENSG00000198900	Chromatin interaction
ENSG00000160783	Chromatin interaction

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs16867845	0.82[ASN][1000 genomes]
rs17189120	0.82[ASN][1000 genomes]
rs17189134	0.82[ASN][1000 genomes]
rs17189155	0.82[ASN][1000 genomes]
rs17195411	0.82[ASN][1000 genomes]
rs17195474	0.82[ASN][1000 genomes]
rs17195488	0.82[ASN][1000 genomes]
rs17195516	0.82[ASN][1000 genomes]
rs2106069	0.82[ASN][1000 genomes]
rs2239514	0.82[ASN][1000 genomes]
rs2239515	0.82[ASN][1000 genomes]
rs2239516	0.82[ASN][1000 genomes]
rs2267638	0.82[ASN][1000 genomes]
rs2267640	0.82[ASN][1000 genomes]
rs2284172	0.85[AFR][1000 genomes]
rs2302347	0.82[ASN][1000 genomes]
rs2394387	0.82[ASN][1000 genomes]
rs2394388	0.82[ASN][1000 genomes]
rs2394389	0.82[ASN][1000 genomes]
rs25497	0.85[AFR][1000 genomes]
rs3815101	0.82[ASN][1000 genomes]
rs4148247	0.82[ASN][1000 genomes]
rs55810373	0.85[AFR][1000 genomes]
rs59272830	0.82[ASN][1000 genomes]
rs59607822	0.82[ASN][1000 genomes]
rs59913575	0.82[ASN][1000 genomes]
rs60081418	0.82[ASN][1000 genomes]
rs60399658	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61733213	0.94[ASN][1000 genomes]
rs6457246	0.82[ASN][1000 genomes]
rs6457247	0.82[ASN][1000 genomes]
rs6457248	0.82[ASN][1000 genomes]
rs6457249	0.82[ASN][1000 genomes]
rs6899769	0.82[ASN][1000 genomes]
rs6901251	0.82[ASN][1000 genomes]
rs6911174	0.82[ASN][1000 genomes]
rs6917434	0.82[ASN][1000 genomes]
rs6917935	0.82[ASN][1000 genomes]
rs6934466	0.82[ASN][1000 genomes]
rs73727463	0.85[AFR][1000 genomes]
rs7742291	0.82[ASN][1000 genomes]
rs7742650	0.82[ASN][1000 genomes]
rs7742754	0.82[ASN][1000 genomes]
rs7749109	0.82[ASN][1000 genomes]
rs7749807	0.82[ASN][1000 genomes]
rs7749978	0.82[ASN][1000 genomes]
rs7767002	0.82[ASN][1000 genomes]
rs7773711	0.94[ASN][1000 genomes]
rs9262120	0.82[ASN][1000 genomes]
rs9461625	0.85[AFR][1000 genomes]
rs9468812	0.94[ASN][1000 genomes]
rs9468817	0.85[AFR][1000 genomes]
rs9468822	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9468823	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9500863	0.85[AFR][1000 genomes]
rs9500864	0.85[AFR][1000 genomes]
rs9500865	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9500866	0.85[AFR][1000 genomes]
rs9500867	0.85[AFR][1000 genomes]
rs9501027	0.85[AFR][1000 genomes]
rs9671	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3519970	chr6:30382942-31378788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
2	esv3519971	chr6:30382942-31378788	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
3	nsv601481	chr6:30422632-31284253	Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1012 gene(s)	inside rSNPs	diseases
4	esv3430377	chr6:30443802-30814426	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	967 gene(s)	inside rSNPs	diseases
5	nsv830626	chr6:30558064-30732905	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	406 gene(s)	inside rSNPs	diseases
6	esv2758041	chr6:30644693-30816319	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
7	esv2759413	chr6:30644693-30816319	Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
8	nsv884100	chr6:30693816-30751326	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
9	nsv884101	chr6:30695920-30733121	Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	163 gene(s)	inside rSNPs	diseases
10	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
11	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
12	nsv884102	chr6:30706013-30720567	Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	158 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30709200-30712600	Flanking Active TSS	Primary B cells from cord blood	blood
2	chr6:30709200-30712600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr6:30709200-30712600	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr6:30709200-30712600	Active TSS	HSMM	muscle
5	chr6:30709400-30712400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
6	chr6:30709600-30712400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:30709600-30712400	Active TSS	Small Intestine	intestine
8	chr6:30709600-30712400	Active TSS	NHDF-Ad	bronchial
9	chr6:30709600-30712600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
10	chr6:30709600-30712600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr6:30709600-30712600	Active TSS	Gastric	stomach
12	chr6:30709600-30712600	Active TSS	Placenta Amnion	Placenta Amnion
13	chr6:30709600-30712800	Active TSS	HUES48 Cell Line	embryonic stem cell
14	chr6:30709600-30713000	Active TSS	H9 Cell Line	embryonic stem cell
15	chr6:30709600-30713200	Active TSS	ES-I3 Cell Line	embryonic stem cell
16	chr6:30709800-30712400	Active TSS	Fetal Heart	heart
17	chr6:30709800-30712400	Active TSS	Lung	lung
18	chr6:30709800-30712400	Active TSS	Sigmoid Colon	Sigmoid Colon
19	chr6:30709800-30712600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr6:30709800-30712600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
21	chr6:30709800-30712600	Active TSS	Duodenum Smooth Muscle	Duodenum
22	chr6:30709800-30712600	Active TSS	Left Ventricle	heart
23	chr6:30709800-30712600	Active TSS	Ovary	ovary
24	chr6:30709800-30712800	Active TSS	iPS-18 Cell Line	embryonic stem cell
25	chr6:30709800-30712800	Active TSS	Fetal Kidney	kidney
26	chr6:30709800-30712800	Active TSS	Right Ventricle	heart
27	chr6:30709800-30713000	Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr6:30710000-30712400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr6:30710000-30712400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr6:30710000-30712400	Active TSS	Primary neutrophils fromperipheralblood	blood
31	chr6:30710000-30712400	Active TSS	Liver	Liver
32	chr6:30710000-30712400	Active TSS	Colonic Mucosa	Colon
33	chr6:30710000-30712400	Active TSS	Colon Smooth Muscle	Colon
34	chr6:30710000-30712400	Active TSS	Esophagus	oesophagus
35	chr6:30710000-30712400	Active TSS	Fetal Stomach	stomach
36	chr6:30710000-30712400	Active TSS	Rectal Mucosa Donor 29	rectum
37	chr6:30710000-30712400	Active TSS	Stomach Mucosa	stomach
38	chr6:30710000-30712400	Active TSS	Stomach Smooth Muscle	stomach
39	chr6:30710000-30712400	Active TSS	Hela-S3	cervix
40	chr6:30710000-30712400	Active TSS	HUVEC	blood vessel
41	chr6:30710000-30712400	Active TSS	Osteobl	bone
42	chr6:30710000-30712600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr6:30710000-30712600	Active TSS	Brain Angular Gyrus	brain
44	chr6:30710000-30712600	Active TSS	Brain Anterior Caudate	brain
45	chr6:30710000-30712600	Active TSS	Brain Cingulate Gyrus	brain
46	chr6:30710000-30712600	Active TSS	Psoas Muscle	Psoas
47	chr6:30710000-30712800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr6:30710000-30712800	Active TSS	Rectal Smooth Muscle	rectum
49	chr6:30710200-30712400	Active TSS	Breast Myoepithelial Primary Cells	Breast
50	chr6:30710200-30712400	Active TSS	Primary monocytes fromperipheralblood	blood

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