Variant report

Variant	rs9469069
Chromosome Location	chr6:31866418-31866419
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF143	chr6:31865375-31866772	K562	blood:	n/a	chr6:31866370-31866385 chr6:31866381-31866390 chr6:31866339-31866348 chr6:31866332-31866350 chr6:31866341-31866350 chr6:31866374-31866392 chr6:31866327-31866346 chr6:31866383-31866392
2	MAZ	chr6:31866196-31866439	Hela-S3	cervix:	n/a	n/a
3	CTCF	chr6:31866300-31866450	RPTEC	kidney:	n/a	n/a
4	FOS	chr6:31866228-31866459	MCF10A-Er-Src	breast:	n/a	n/a
5	SIX5	chr6:31866116-31866672	H1-hESC	embryonic stem cell:	n/a	chr6:31866339-31866348 chr6:31866381-31866390 chr6:31866341-31866350 chr6:31866338-31866352 chr6:31866383-31866392 chr6:31866380-31866394 chr6:31866386-31866395
6	POLR2A	chr6:31865955-31866880	SK-N-MC	brain:	n/a	n/a
7	SIN3AK20	chr6:31865966-31866456	H1-hESC	embryonic stem cell:	n/a	n/a
8	MYBL2	chr6:31865329-31866580	HepG2	liver:	n/a	n/a
9	USF1	chr6:31866153-31866437	SK-N-SH_RA	brain:	n/a	n/a
10	TEAD4	chr6:31865924-31866635	HepG2	liver:	n/a	n/a
11	SIX5	chr6:31866125-31866611	GM12878	blood:	n/a	chr6:31866380-31866394 chr6:31866339-31866348 chr6:31866381-31866390 chr6:31866341-31866350 chr6:31866386-31866395 chr6:31866338-31866352 chr6:31866383-31866392
12	TBP	chr6:31866158-31866500	K562	blood:	n/a	n/a
13	POLR2A	chr6:31865174-31866861	PFSK-1	brain:	n/a	n/a
14	POLR2A	chr6:31865173-31866674	ECC-1	luminal epithelium:	n/a	n/a
15	TCF12	chr6:31865323-31866644	A549	lung:	n/a	chr6:31865637-31865645 chr6:31865685-31865692
16	USF1	chr6:31865235-31866569	ECC-1	luminal epithelium:	n/a	chr6:31865496-31865507
17	CTCF	chr6:31866280-31866430	GM12865	blood:	n/a	n/a
18	NFIC	chr6:31865401-31866469	GM12878	blood:	n/a	n/a
19	BHLHE40	chr6:31864968-31866504	K562	blood:	n/a	chr6:31865197-31865213 chr6:31865051-31865067
20	MAX	chr6:31865026-31866474	NB4	blood:	n/a	chr6:31865500-31865509 chr6:31865146-31865162
21	MAZ	chr6:31864710-31866608	GM12878	blood:	n/a	chr6:31865500-31865509 chr6:31865146-31865162
22	PBX3	chr6:31865176-31866818	SK-N-SH	brain:	n/a	chr6:31866589-31866598
23	SIN3AK20	chr6:31866118-31866699	SK-N-SH	brain:	n/a	n/a
24	YY1	chr6:31865092-31866419	SK-N-SH	brain:	n/a	chr6:31865197-31865208
25	MAX	chr6:31865279-31866562	ECC-1	luminal epithelium:	n/a	chr6:31865500-31865509
26	POLR2A	chr6:31865286-31866424	HL-60	blood:	n/a	n/a
27	SMC3	chr6:31866135-31866447	Hela-S3	cervix:	n/a	chr6:31866303-31866313
28	CHD2	chr6:31866197-31866503	Hela-S3	cervix:	n/a	n/a
29	SIN3AK20	chr6:31864842-31866486	K562	blood:	n/a	n/a
30	ELF1	chr6:31866207-31866429	HepG2	liver:	n/a	n/a
31	NFIC	chr6:31865373-31866577	HepG2	liver:	n/a	n/a
32	POLR2A	chr6:31865218-31866828	PANC-1	pancreas:	n/a	n/a
33	MYC	chr6:31865072-31866639	NB4	blood:	n/a	chr6:31865500-31865509 chr6:31865146-31865162
34	SP1	chr6:31865127-31866692	HCT-116	colon:	n/a	chr6:31866654-31866663 chr6:31865389-31865403 chr6:31866643-31866657 chr6:31865395-31865409 chr6:31866650-31866664 chr6:31865396-31865405 chr6:31865230-31865240
35	TEAD4	chr6:31865332-31866553	K562	blood:	n/a	n/a
36	SIN3AK20	chr6:31865913-31866450	HepG2	liver:	n/a	n/a
37	TBL1XR1	chr6:31866176-31866502	K562	blood:	n/a	n/a
38	MXI1	chr6:31863739-31866744	SK-N-SH	brain:	n/a	n/a
39	CREB1	chr6:31865008-31866882	HepG2	liver:	n/a	n/a
40	SIX5	chr6:31866084-31866552	A549	lung:	n/a	chr6:31866339-31866348 chr6:31866381-31866390 chr6:31866341-31866350 chr6:31866338-31866352 chr6:31866383-31866392 chr6:31866380-31866394 chr6:31866386-31866395
41	SMC3	chr6:31866130-31866511	GM12878	blood:	n/a	chr6:31866303-31866313
42	RUNX3	chr6:31866145-31866524	GM12878	blood:	n/a	n/a
43	ETS1	chr6:31866138-31866533	GM12878	blood:	n/a	chr6:31866380-31866393 chr6:31866338-31866351 chr6:31866339-31866352
44	PML	chr6:31865082-31866656	GM12878	blood:	n/a	n/a
45	TBP	chr6:31865468-31866487	Hela-S3	cervix:	n/a	n/a
46	MAX	chr6:31864829-31866678	K562	blood:	n/a	chr6:31865500-31865509 chr6:31865146-31865162
47	YY1	chr6:31866150-31866472	GM12878	blood:	n/a	n/a
48	KAP1	chr6:31865537-31866552	U2OS	brain:	n/a	n/a
49	HCFC1	chr6:31865276-31866769	K562	blood:	n/a	n/a
50	EBF1	chr6:31865382-31866470	GM12878	blood:	n/a	chr6:31865565-31865576 chr6:31865566-31865576

No.	Distal block	Cell Line	Cell type
1	chr6:31864040..31872511-chr6:31917614..31930102,27	MCF-7	breast:
2	chr6:31856075..31861147-chr6:31862978..31867521,9	K562	blood:
3	chr6:31859669..31862692-chr6:31863697..31866493,6	MCF-7	breast:
4	chr6:31668504..31670633-chr6:31865302..31866839,2	K562	blood:
5	chr6:31864683..31867105-chr6:31939845..31941610,2	K562	blood:
6	chr6:31705886..31708099-chr6:31864785..31867152,2	K562	blood:
7	chr6:31865534..31868319-chr6:31914405..31916716,2	MCF-7	breast:
8	chr6:31851566..31853842-chr6:31864020..31866737,2	MCF-7	breast:
9	chr6:31800669..31805219-chr6:31862460..31868046,11	K562	blood:
10	chr6:31506998..31509094-chr6:31864561..31866443,2	MCF-7	breast:
11	chr6:31844613..31847430-chr6:31865372..31868871,3	MCF-7	breast:
12	chr6:31618484..31622073-chr6:31864833..31868659,4	K562	blood:
13	chr6:31864115..31868338-chr6:31917147..31921993,5	K562	blood:
14	chr6:31793170..31796834-chr6:31863715..31868848,6	K562	blood:
15	chr6:31864770..31867210-chr6:31916768..31918647,2	K562	blood:
16	chr6:31780956..31783456-chr6:31865283..31866829,2	K562	blood:
17	chr6:31862589..31864971-chr6:31865421..31867201,2	MCF-7	breast:
18	chr6:31864712..31866806-chr6:31924793..31927734,3	K562	blood:
19	chr6:31865326..31867816-chr6:32162690..32165281,2	K562	blood:
20	chr6:31761655..31763549-chr6:31865451..31867211,2	MCF-7	breast:
21	chr6:31740931..31743197-chr6:31865687..31868469,2	MCF-7	breast:
22	chr6:31866210..31871385-chr6:31935988..31941288,8	K562	blood:
23	chr6:31618325..31621676-chr6:31863690..31867276,5	K562	blood:
24	chr6:31793567..31795158-chr6:31866133..31867825,2	MCF-7	breast:
25	chr6:31801616..31806746-chr6:31865132..31870777,8	MCF-7	breast:
26	chr6:31864133..31871768-chr6:31886295..31891953,13	MCF-7	breast:
27	chr6:31798354..31804916-chr6:31860790..31871982,18	MCF-7	breast:
28	chr6:31627970..31635325-chr6:31864036..31871429,12	K562	blood:
29	chr6:31828023..31833065-chr6:31863439..31869544,9	K562	blood:
30	chr6:31861403..31866645-chr6:31932025..31935945,5	MCF-7	breast:
31	chr6:31836840..31843251-chr6:31862592..31868285,8	MCF-7	breast:
32	chr6:31865653..31867869-chr6:31911322..31913158,2	MCF-7	breast:
33	chr6:31758020..31763887-chr6:31863868..31868391,6	K562	blood:
34	chr6:31850468..31854025-chr6:31863862..31867993,5	MCF-7	breast:
35	chr6:31862879..31872535-chr6:31911667..31928766,47	MCF-7	breast:
36	chr6:31780574..31784383-chr6:31865157..31867218,4	K562	blood:
37	chr6:31863628..31867852-chr6:31937946..31941812,10	MCF-7	breast:
38	chr6:31864068..31872693-chr6:31934470..31941847,12	MCF-7	breast:
39	chr6:31800867..31807275-chr6:31862460..31868132,16	K562	blood:
40	chr6:31795475..31798260-chr6:31864062..31867064,3	K562	blood:

Variant related genes	Relation type
C2	TF binding region
EHMT2	TF binding region
ENSG00000201823	Chromatin interaction
ENSG00000266776	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000243649	Chromatin interaction
ENSG00000255152	Chromatin interaction
ENSG00000204387	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000237080	Chromatin interaction
ENSG00000204389	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000204351	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204356	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000201207	Chromatin interaction
ENSG00000204390	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000201754	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000221267	Chromatin interaction
ENSG00000204410	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000204439	Chromatin interaction
ENSG00000263020	Chromatin interaction

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10081127	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13217120	0.85[AMR][1000 genomes]
rs28589703	0.82[EUR][1000 genomes]
rs34555781	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs57393998	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs658808	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71563389	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9461731	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9469072	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9501157	0.82[EUR][1000 genomes]
rs9501598	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
2	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
5	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
7	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
9	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
10	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
11	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
12	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
13	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
14	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
15	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
16	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
17	nsv884472	chr6:31813898-31870856	Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
18	nsv508399	chr6:31829474-31902423	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
19	nsv884474	chr6:31836055-31870326	Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
20	nsv462875	chr6:31838441-31907147	Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
21	nsv601960	chr6:31838441-31907147	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
22	nsv884475	chr6:31840625-31880320	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
23	nsv884476	chr6:31848000-31870326	Genic enhancers Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
24	nsv884477	chr6:31850724-31870326	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
25	nsv884478	chr6:31850724-31874505	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
26	nsv884479	chr6:31850724-31878433	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
27	nsv884480	chr6:31851234-31870856	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
28	nsv884481	chr6:31851234-31878433	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
29	nsv884482	chr6:31851234-31880320	Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
30	nsv966619	chr6:31852653-31870444	Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
31	nsv884483	chr6:31852692-31868075	Flanking Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	42 gene(s)	inside rSNPs	diseases
32	nsv884484	chr6:31854543-31879158	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	50 gene(s)	inside rSNPs	diseases
33	nsv884485	chr6:31860576-31880320	Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
34	nsv884486	chr6:31861207-31869135	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	46 gene(s)	inside rSNPs	diseases
35	nsv884487	chr6:31861207-31870326	Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
36	nsv884488	chr6:31861207-31870856	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
37	nsv884489	chr6:31861207-31870856	Strong transcription Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
38	nsv884490	chr6:31861207-31871485	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
39	nsv884491	chr6:31861207-31872551	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
40	nsv884492	chr6:31861207-31874505	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
41	nsv884493	chr6:31861207-31876647	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
42	nsv884494	chr6:31861207-31876647	Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
43	nsv884495	chr6:31861207-31878433	Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
44	nsv884496	chr6:31861207-31878495	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
45	nsv884497	chr6:31861207-31879158	Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
46	nsv884498	chr6:31861207-31880320	Flanking Active TSS Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
47	esv3392811	chr6:31864198-31866746	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	37 gene(s)	inside rSNPs	diseases
48	nsv884499	chr6:31864304-31872551	Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
49	nsv884500	chr6:31864304-31873465	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
50	nsv884501	chr6:31864304-31874505	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31864200-31866600	Active TSS	Right Atrium	heart
2	chr6:31864400-31866800	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr6:31864600-31866600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
4	chr6:31864600-31866600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:31864600-31866600	Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr6:31864600-31866600	Active TSS	Esophagus	oesophagus
7	chr6:31864600-31866600	Active TSS	Ovary	ovary
8	chr6:31864600-31866800	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr6:31864600-31866800	Active TSS	Pancreatic Islets	Pancreatic Islet
10	chr6:31864800-31866600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr6:31864800-31866600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr6:31864800-31866600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr6:31864800-31866600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
14	chr6:31864800-31866600	Active TSS	Colonic Mucosa	Colon
15	chr6:31864800-31866600	Active TSS	Right Ventricle	heart
16	chr6:31865000-31867400	Active TSS	Fetal Brain Female	brain
17	chr6:31865600-31866600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
18	chr6:31865600-31866600	Flanking Active TSS	Primary B cells from cord blood	blood
19	chr6:31865600-31866800	Flanking Active TSS	Primary hematopoietic stem cells	blood
20	chr6:31865600-31866800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr6:31865600-31866800	Flanking Active TSS	Adipose Nuclei	Adipose
22	chr6:31865600-31867000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
23	chr6:31865600-31867200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr6:31865800-31866600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
25	chr6:31865800-31866600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
26	chr6:31865800-31866600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr6:31865800-31866600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
28	chr6:31865800-31866600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr6:31865800-31866800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
30	chr6:31865800-31866800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
31	chr6:31865800-31866800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
32	chr6:31865800-31866800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr6:31865800-31866800	Flanking Active TSS	Fetal Muscle Leg	muscle
34	chr6:31865800-31866800	Flanking Active TSS	Stomach Smooth Muscle	stomach
35	chr6:31865800-31866800	Flanking Active TSS	HUVEC	blood vessel
36	chr6:31865800-31866800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
37	chr6:31865800-31866800	Flanking Active TSS	NH-A	brain
38	chr6:31865800-31866800	Flanking Active TSS	Osteobl	bone
39	chr6:31865800-31867400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr6:31866000-31866600	Active TSS	Brain Germinal Matrix	brain
41	chr6:31866000-31866600	Flanking Active TSS	Placenta	Placenta
42	chr6:31866000-31866800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr6:31866000-31866800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
44	chr6:31866000-31866800	Flanking Active TSS	Brain Substantia Nigra	brain
45	chr6:31866000-31866800	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
46	chr6:31866000-31866800	Flanking Active TSS	Fetal Lung	lung
47	chr6:31866000-31867400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr6:31866000-31867600	Flanking Active TSS	Dnd41	blood
49	chr6:31866200-31866600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr6:31866200-31866600	Flanking Active TSS	Fetal Brain Male	brain

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