Variant report

Variant	rs9489283
Chromosome Location	chr6:118259966-118259967
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:118253546..118255566-chr6:118258595..118261283,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2789013	0.86[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530526	chr6:118027339-118718476	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118259000-118260000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:118259000-118260200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
3	chr6:118259000-118260600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:118259000-118260600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr6:118259000-118260600	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr6:118259000-118260600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr6:118259000-118261400	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr6:118259200-118261200	Enhancers	H1 Cell Line	embryonic stem cell
9	chr6:118259400-118260400	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr6:118259400-118260600	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr6:118259400-118260800	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr6:118259600-118260000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:118259600-118260000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr6:118259600-118260000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr6:118259600-118260000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr6:118259600-118260000	Enhancers	Fetal Stomach	stomach
17	chr6:118259600-118260200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr6:118259600-118260200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr6:118259600-118260200	Enhancers	HUES48 Cell Line	embryonic stem cell
20	chr6:118259600-118260200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr6:118259600-118260400	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr6:118259800-118260200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr6:118259800-118260400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr6:118259800-118266800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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