Variant report

Variant rs9501771
Chromosome Location chr6:1786915-1786916
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1762800-1801600 Weak transcription Colonic Mucosa Colon
2 chr6:1763000-1792600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr6:1768200-1803600 Weak transcription Small Intestine intestine
4 chr6:1770800-1792600 Weak transcription Thymus Thymus
5 chr6:1770800-1805600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:1772000-1788400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:1772000-1798800 Weak transcription Gastric stomach
8 chr6:1772200-1788000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:1774800-1789400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr6:1775000-1797000 Weak transcription Fetal Intestine Large intestine
11 chr6:1776200-1828800 Weak transcription Primary T cells from cord blood blood
12 chr6:1779200-1788200 Weak transcription Right Atrium heart
13 chr6:1779400-1788200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:1779600-1798000 Weak transcription Aorta Aorta
15 chr6:1780400-1787200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr6:1780800-1798000 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:1781000-1787600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr6:1781000-1802400 Weak transcription Primary hematopoietic stem cells blood
19 chr6:1781800-1787800 Weak transcription Esophagus oesophagus
20 chr6:1782000-1788000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr6:1784200-1790200 Enhancers HUVEC blood vessel
22 chr6:1784600-1788400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:1784800-1788200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr6:1784800-1788200 Weak transcription Left Ventricle heart
25 chr6:1785000-1787000 Strong transcription Duodenum Mucosa Duodenum
26 chr6:1785000-1787000 Strong transcription HepG2 liver
27 chr6:1785000-1788200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:1785200-1788200 Weak transcription Adipose Nuclei Adipose
29 chr6:1785400-1788000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr6:1786000-1788000 Weak transcription Pancreas Pancrea
31 chr6:1786000-1788400 Weak transcription Spleen Spleen
32 chr6:1786000-1794800 Weak transcription Fetal Stomach stomach
33 chr6:1786200-1788000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:1786200-1798800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr6:1786600-1787000 Enhancers NHDF-Ad bronchial
36 chr6:1786600-1787800 Enhancers GM12878-XiMat blood
37 chr6:1786600-1789800 Enhancers Osteobl bone
38 chr6:1786800-1787400 Enhancers Primary T helper 17 cells PMA-I stimulated --
39 chr6:1786800-1796200 Weak transcription Fetal Intestine Small intestine

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