Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1184606	1.00[EUR][1000 genomes]
rs1360387	0.80[YRI][hapmap]
rs1411746	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1411749	0.80[YRI][hapmap]
rs1411754	0.80[YRI][hapmap]
rs1411755	0.83[YRI][hapmap]
rs1926623	1.00[CEU][hapmap];0.95[GIH][hapmap];0.81[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.99[EUR][1000 genomes]
rs1929185	0.80[YRI][hapmap]
rs35205260	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4420386	0.80[YRI][hapmap]
rs7323523	0.95[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7986701	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7992137	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.82[MEX][hapmap];0.97[TSI][hapmap]
rs9301786	0.94[CEU][hapmap]
rs9516021	0.83[ASW][hapmap];0.95[CEU][hapmap];0.95[GIH][hapmap];0.81[MEX][hapmap];0.92[TSI][hapmap]
rs9516022	0.80[YRI][hapmap]
rs9523546	0.80[YRI][hapmap]
rs9523548	0.80[YRI][hapmap]
rs9523554	0.80[YRI][hapmap]
rs9584006	0.80[YRI][hapmap]
rs9589460	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs9589465	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.82[MEX][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1035365	chr13:92805325-92926114	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv456067	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv562726	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv900902	chr13:92884370-92942274	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: