Variant report

Variant	rs9524612
Chromosome Location	chr13:95429892-95429893
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12877908	1.00[ASN][1000 genomes]
rs1830863	1.00[ASN][1000 genomes]
rs35787279	1.00[ASN][1000 genomes]
rs35858065	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832687	chr13:95412811-95582161	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2763049	chr13:95414554-95445266	Enhancers Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95422600-95431800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr13:95428600-95430000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr13:95428800-95430200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr13:95429200-95430000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr13:95429400-95430200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr13:95429800-95432400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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