Variant report

Variant	rs9532013
Chromosome Location	chr13:37770858-37770859
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10219784	1.00[ASN][1000 genomes]
rs1980732	1.00[ASN][1000 genomes]
rs1980733	1.00[ASN][1000 genomes]
rs4566028	1.00[ASN][1000 genomes]
rs73177085	1.00[ASN][1000 genomes]
rs7322413	1.00[ASN][1000 genomes]
rs7336653	1.00[ASN][1000 genomes]
rs7982476	1.00[ASN][1000 genomes]
rs7983976	0.81[EUR][1000 genomes]
rs7986414	1.00[ASN][1000 genomes]
rs7988460	1.00[ASN][1000 genomes]
rs7991565	1.00[ASN][1000 genomes]
rs9315475	1.00[ASN][1000 genomes]
rs9603150	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37766400-37772000	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr13:37768000-37771800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr13:37768000-37772000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr13:37768600-37775400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr13:37768600-37775400	Weak transcription	NHLF	lung
6	chr13:37769000-37772600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr13:37769200-37772400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr13:37769400-37771800	Weak transcription	Osteobl	bone
9	chr13:37769400-37772800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr13:37769400-37775600	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr13:37769600-37775400	Weak transcription	NHDF-Ad	bronchial
12	chr13:37769800-37773000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr13:37770000-37772800	Weak transcription	NH-A	brain
14	chr13:37770800-37772800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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