The 2.0 version of rSNPBase

Variant report

Variant rs9535140
Chromosome Location chr13:49639385-49639386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49582200-49659000 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr13:49584200-49649200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr13:49592800-49649600 Weak transcription Fetal Intestine Large intestine
4 chr13:49598000-49650200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr13:49599000-49649200 Weak transcription Primary B cells from peripheral blood blood
6 chr13:49601800-49660600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr13:49603200-49649200 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr13:49603200-49652200 Weak transcription Dnd41 blood
9 chr13:49605200-49643400 Weak transcription HSMM muscle
10 chr13:49608800-49658800 Weak transcription Duodenum Mucosa Duodenum
11 chr13:49625600-49642600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:49626200-49650200 Weak transcription Primary T cells fromperipheralblood blood
13 chr13:49627200-49656800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr13:49627400-49656800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr13:49627400-49672400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr13:49628600-49656600 Weak transcription Thymus Thymus
17 chr13:49628800-49657000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr13:49629000-49665600 Weak transcription Lung lung
19 chr13:49629200-49650200 Weak transcription Fetal Muscle Leg muscle
20 chr13:49629600-49649400 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr13:49629600-49650000 Weak transcription Fetal Stomach stomach
22 chr13:49629600-49665400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr13:49630000-49650600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr13:49630200-49642800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr13:49630200-49656800 Weak transcription Aorta Aorta
26 chr13:49630400-49664000 Weak transcription Fetal Intestine Small intestine
27 chr13:49632200-49664800 Weak transcription Fetal Lung lung
28 chr13:49632800-49640400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr13:49635000-49650600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr13:49635000-49664400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr13:49636000-49642600 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr13:49636200-49650000 Weak transcription Liver Liver
33 chr13:49636200-49652800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr13:49636600-49642000 Weak transcription Primary T cells from cord blood blood
35 chr13:49636800-49650000 Weak transcription NH-A brain
36 chr13:49636800-49652800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr13:49636800-49667800 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr13:49637000-49645400 Weak transcription Muscle Satellite Cultured Cells --
39 chr13:49637000-49649200 Weak transcription Primary hematopoietic stem cells blood
40 chr13:49637000-49649400 Weak transcription NHDF-Ad bronchial
41 chr13:49637000-49649600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr13:49637000-49650000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr13:49637200-49649000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr13:49637400-49648400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr13:49637800-49649200 Weak transcription K562 blood
46 chr13:49637800-49656200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr13:49638000-49639400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr13:49638000-49639600 Weak transcription Fetal Heart heart
49 chr13:49638000-49639600 Enhancers Placenta Placenta
50 chr13:49638000-49645600 Weak transcription Osteobl bone

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Last update: Aug 31, 2015