Variant report

Variant rs9535196
Chromosome Location chr13:49883314-49883315
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49867200-49884200 Weak transcription Fetal Brain Female brain
2 chr13:49875800-49883800 Weak transcription Fetal Intestine Small intestine
3 chr13:49875800-49884000 Weak transcription Primary hematopoietic stem cells blood
4 chr13:49875800-49884200 Weak transcription Primary T cells from cord blood blood
5 chr13:49875800-49887800 Weak transcription Fetal Intestine Large intestine
6 chr13:49875800-49887800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr13:49875800-49891000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr13:49876000-49884000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr13:49876200-49884200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr13:49876200-49884200 Weak transcription Brain Germinal Matrix brain
11 chr13:49876200-49895000 Weak transcription Primary T cells fromperipheralblood blood
12 chr13:49876200-49935600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr13:49876400-49887800 Weak transcription Colonic Mucosa Colon
14 chr13:49876400-49887800 Weak transcription Fetal Heart heart
15 chr13:49876400-49887800 Weak transcription Placenta Amnion Placenta Amnion
16 chr13:49877200-49883800 Enhancers Adipose Nuclei Adipose
17 chr13:49878200-49893600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr13:49878200-49894800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr13:49878400-49888000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr13:49878800-49884200 Weak transcription Gastric stomach
21 chr13:49879000-49887800 Weak transcription Spleen Spleen
22 chr13:49879200-49883600 Enhancers Skeletal Muscle Male skeletal muscle
23 chr13:49879400-49883600 Enhancers Fetal Muscle Leg muscle
24 chr13:49879800-49883600 Enhancers Fetal Muscle Trunk muscle
25 chr13:49880200-49885800 Weak transcription Fetal Kidney kidney
26 chr13:49880400-49883600 Enhancers Ovary ovary
27 chr13:49880400-49894200 Weak transcription Primary B cells from cord blood blood
28 chr13:49880600-49888600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr13:49880600-49896000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr13:49881000-49884000 Enhancers Stomach Smooth Muscle stomach
31 chr13:49881400-49883400 Enhancers Fetal Lung lung
32 chr13:49881400-49883600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr13:49881400-49884600 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr13:49881600-49883400 Enhancers NHLF lung
35 chr13:49881600-49883600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr13:49881600-49883600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr13:49881600-49884000 Enhancers Muscle Satellite Cultured Cells --
38 chr13:49881600-49884200 Enhancers Brain Angular Gyrus brain
39 chr13:49881600-49884200 Enhancers Brain Cingulate Gyrus brain
40 chr13:49881600-49884200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr13:49881600-49884200 Enhancers Pancreas Pancrea
42 chr13:49881600-49884800 Enhancers Brain Substantia Nigra brain
43 chr13:49881800-49883400 Enhancers HepG2 liver
44 chr13:49881800-49883400 Enhancers NHEK skin
45 chr13:49881800-49883600 Enhancers Colon Smooth Muscle Colon
46 chr13:49881800-49906800 Weak transcription Fetal Brain Male brain
47 chr13:49882000-49883400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr13:49882200-49883400 Enhancers Esophagus oesophagus
49 chr13:49882200-49883600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr13:49882200-49883600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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